TADB
Browse by organism | type II  or  its classification  | type I | type III  | type IV | type V  | type VI

At the heart of TADB is this ‘Browse by organism’ page that provides a hyperlinked organized catalog of over 900 prokaryotic genomes with TA systems identified. TADB provides an web-interface, allowing users to view an entire genome’s TA loci repertoire within the context of the whole replicon and to access individual pages dedicated to each TA locus pair, toxin and antitoxin as required.

Alphabet A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Full list Plasmid list Chromosome list
Only TA-containing replicons are listed

#Repliconascending1descending1NCBI accession no. TApair numberascending2descending2
1Acaryochloris marina MBIC11017 chromosomeNC_009925 21
2Acidimicrobium ferrooxidans DSM 10331 chromosomeNC_013124 1
3Acidithiobacillus ferrooxidans ATCC 23270 chromosomeNC_011761 1
4Acidithiobacillus ferrooxidans ATCC 53993 chromosomeNC_011206 27
5Acidovorax citrulli AAC00-1 chromosomeNC_008752 10
6Acidovorax sp. JS42 chromosomeNC_008782 19
7Acinetobacter baumannii ATCC 17978 chromosomeNC_009085 4
8Acinetobacter baumannii AYE chromosomeNC_010410 2
9Acinetobacter baumannii SDF chromosomeNC_010400 3
10Acinetobacter sp. ADP1 chromosomeNC_005966 4
11Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosomeNC_010278 11
12Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosomeNC_009053 10
13Actinobacillus succinogenes 130Z chromosomeNC_009655 3
14Aeromonas hydrophila subsp. hydrophila ATCC 7966 chromosomeNC_008570 2
15Aeropyrum pernix K1 chromosomeNC_000854 12
16Agrobacterium tumefaciens str. C58 chromosomeNC_003062 17
17Agrobacterium vitis S4 chromosomeNC_011989 2
18Akkermansia muciniphila ATCC BAA-835 chromosomeNC_010655 1
19Alcanivorax borkumensis SK2 chromosomeNC_008260 1
20Aliivibrio salmonicida LFI1238 chromosomeNC_011312 2
21Alkalilimnicola ehrlichii MLHE-1 chromosomeNC_008340 8
22Alkaliphilus metalliredigens QYMF chromosomeNC_009633 11
23Alkaliphilus oremlandii OhILAs chromosomeNC_009922 3
24Alteromonas macleodii str. Deep ecotype chromosomeNC_011138 1
25Anaeromyxobacter dehalogenans 2CP-C chromosomeNC_007760 7
26Anaeromyxobacter sp. Fw109-5 chromosomeNC_009675 8
27Anaeromyxobacter sp. K chromosomeNC_011145 5
28Archaeoglobus fulgidus DSM 4304 chromosomeNC_000917 37
29Arcobacter butzleri RM4018 chromosomeNC_009850 4
30Arthrobacter aurescens TC1 chromosomeNC_008711 5
31Azoarcus sp. BH72 chromosomeNC_008702 6
32Azorhizobium caulinodans ORS 571 chromosomeNC_009937 12
33Azotobacter vinelandii DJ chromosomeNC_012560 1
34Bacillus anthracis str. Ames chromosomeNC_003997 4
35Bacillus anthracis str. Sterne chromosomeNC_005945 4
36Bacillus cereus ATCC 10987 chromosomeNC_003909 3
37Bacillus cereus ATCC 14579 chromosomeNC_004722 4
38Bacillus cereus E33L chromosomeNC_006274 4
39Bacillus clausii KSM-K16 chromosomeNC_006582 5
40Bacillus cytotoxicus NVH 391-98 chromosomeNC_009674 5
41Bacillus halodurans C-125 chromosomeNC_002570 6
42Bacillus licheniformis DSM 13 = ATCC 14580 chromosomeNC_006270 3
43Bacillus pumilus SAFR-032 chromosomeNC_009848 2
44Bacillus subtilis subsp. subtilis str. 168 chromosomeNC_000964 8 [3 experimental]
45Bacillus thuringiensis serovar konkukian str. 97-27 chromosomeNC_005957 2
46Bacillus weihenstephanensis KBAB4 chromosomeNC_010184 5
47Bacteroides fragilis NCTC 9343 chromosomeNC_003228 4
48Bacteroides fragilis YCH46 chromosomeNC_006347 8
49Bacteroides thetaiotaomicron VPI-5482 chromosomeNC_004663 4
50Bacteroides vulgatus ATCC 8482 chromosomeNC_009614 6
51Bartonella bacilliformis KC583 chromosomeNC_008783 4
52Bartonella henselae str. Houston-1 chromosomeNC_005956 12
53Bdellovibrio bacteriovorus HD100 chromosomeNC_005363 3
54Beijerinckia indica subsp. indica ATCC 9039 chromosomeNC_010581 12
55Bifidobacterium longum DJO10A chromosomeNC_010816 5
56Bifidobacterium longum NCC2705 chromosomeNC_004307 2
57Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 chromosomeNC_011593 6
58Bifidobacterium longum subsp. longum JDM301 chromosomeNC_014169 1 [1 experimental]
59Bordetella avium 197N chromosomeNC_010645 5
60Bordetella bronchiseptica RB50 chromosomeNC_002927 12
61Bordetella parapertussis 12822 chromosomeNC_002928 13
62Bordetella pertussis Tohama I chromosomeNC_002929 7
63Bordetella petrii DSM 12804 chromosomeNC_010170 14
64Bradyrhizobium diazoefficiens USDA 110 chromosomeNC_004463 15 [1 experimental]
65Bradyrhizobium sp. ORS 278 chromosomeNC_009445 9
66Brucella abortus bv. 1 str. 9-941 chromosomeNC_006932 4
67Brucella abortus S19 chromosomeNC_010740 1
68Brucella canis ATCC 23365 chromosomeNC_010103 3
69Brucella melitensis biovar Abortus 2308 chromosomeNC_007618 4 [2 experimental]
70Brucella melitensis bv. 1 str. 16M chromosomeNC_003317 2
71Brucella ovis ATCC 25840 chromosomeNC_009504 2
72Brucella suis 1330 chromosomeNC_004310 3
73Brucella suis ATCC 23445 chromosomeNC_010167 1
74Burkholderia ambifaria AMMD chromosomeNC_008390 6
75Burkholderia ambifaria MC40-6 chromosomeNC_010551 4
76Burkholderia ambifaria MC40-6 chromosomeNC_010552 2
77Burkholderia cenocepacia AU 1054 chromosomeNC_008060 10
78Burkholderia cenocepacia AU 1054 chromosomeNC_008062 1
79Burkholderia cenocepacia HI2424 chromosomeNC_008542 9
80Burkholderia cenocepacia MC0-3 chromosomeNC_010508 9
81Burkholderia mallei ATCC 23344 chromosomeNC_006348 1
82Burkholderia mallei NCTC 10229 chromosomeNC_008835 1
83Burkholderia mallei NCTC 10247 chromosomeNC_009079 1
84Burkholderia mallei SAVP1 chromosomeNC_008785 1
85Burkholderia multivorans ATCC 17616 chromosomeNC_010084 4
86Burkholderia phymatum STM815 chromosomeNC_010622 1
87Burkholderia phytofirmans PsJN chromosomeNC_010676 8
88Burkholderia pseudomallei 1106a chromosomeNC_009076 3
89Burkholderia pseudomallei 1710b chromosomeNC_007434 3
90Burkholderia pseudomallei 668 chromosomeNC_009074 1
91Burkholderia pseudomallei K96243 chromosomeNC_006350 1
92Burkholderia pseudomallei K96243 chromosomeNC_006351 9
93Burkholderia lata chromosomeNC_007510 11
94Burkholderia lata chromosomeNC_007509 1
95Burkholderia thailandensis E264 chromosomeNC_007651 1
96Burkholderia thailandensis E264 chromosomeNC_007650 5
97Burkholderia vietnamiensis G4 chromosomeNC_009254 9
98Burkholderia xenovorans LB400 chromosomeNC_007951 8
99Caldicellulosiruptor saccharolyticus DSM 8903 chromosomeNC_009437 22
100Caldivirga maquilingensis IC-167 chromosomeNC_009954 6
101Campylobacter concisus 13826 chromosomeNC_009802 4
102Campylobacter curvus 525.92 chromosomeNC_009715 3
103Campylobacter hominis ATCC BAA-381 chromosomeNC_009714 1
104Campylobacter jejuni RM1221 chromosomeNC_003912 3
105Campylobacter jejuni subsp. doylei 269.97 chromosomeNC_009707 1
106Campylobacter jejuni subsp. jejuni 81-176 chromosomeNC_008787 1
107Candidatus Amoebophilus asiaticus 5a2 chromosomeNC_010830 2
108Candidatus Desulforudis audaxviator MP104C chromosomeNC_010424 23
109Candidatus Korarchaeum cryptofilum OPF8 chromosomeNC_010482 12
110Candidatus Koribacter versatilis Ellin345 chromosomeNC_008009 24
111Candidatus Protochlamydia amoebophila UWE25 chromosomeNC_005861 9
112Candidatus Solibacter usitatus Ellin6076 chromosomeNC_008536 48
113Carboxydothermus hydrogenoformans Z-2901 chromosomeNC_007503 11
114Caulobacter crescentus CB15 chromosomeNC_002696 14 [1 experimental]
115Caulobacter crescentus NA1000 chromosomeNC_011916 1 [1 experimental]
116Caulobacter sp. K31 chromosomeNC_010338 1
117Cellvibrio japonicus Ueda107 chromosomeNC_010995 19
118Chlorobaculum parvum NCIB 8327 chromosomeNC_011027 6
119Chlorobium chlorochromatii CaD3 chromosomeNC_007514 41
120Chlorobium limicola DSM 245 chromosomeNC_010803 28
121Chlorobium luteolum DSM 273 chromosomeNC_007512 15
122Chlorobium phaeobacteroides BS1 chromosomeNC_010831 43
123Chlorobium phaeobacteroides DSM 266 chromosomeNC_008639 29
124Chlorobium phaeovibrioides DSM 265 (Prosthecochloris vibrioformis) chromosomeNC_009337 3
125Chlorobium tepidum TLS chromosomeNC_002932 3
126Chloroflexus aggregans DSM 9485 chromosomeNC_011831 1
127Chloroflexus aurantiacus J-10-fl chromosomeNC_010175 10
128Chloroherpeton thalassium ATCC 35110 chromosomeNC_011026 6
129Chromobacterium violaceum ATCC 12472 chromosomeNC_005085 1
130Chromohalobacter salexigens DSM 3043 chromosomeNC_007963 5
131Citrobacter koseri ATCC BAA-895 chromosomeNC_009792 8
132Clostridium acetobutylicum ATCC 824 chromosomeNC_003030 3
133Clostridium beijerinckii NCIMB 8052 chromosomeNC_009617 3
134Clostridium botulinum A str. ATCC 19397 chromosomeNC_009697 2
135Clostridium botulinum A str. ATCC 3502 chromosomeNC_009495 4
136Clostridium botulinum A str. Hall chromosomeNC_009698 2
137Clostridium botulinum B str. Eklund 17B chromosomeNC_010674 6
138Clostridium botulinum E3 str. Alaska E43 chromosomeNC_010723 8
139Clostridium botulinum F str. Langeland chromosomeNC_009699 3
140Clostridium difficile 630 chromosomeNC_009089 4
141Clostridium kluyveri DSM 555 chromosomeNC_009706 13
142Clostridium novyi NT chromosomeNC_008593 3
143Clostridium perfringens ATCC 13124 chromosomeNC_008261 4
144Clostridium perfringens SM101 chromosomeNC_008262 1
145Clostridium perfringens str. 13 chromosomeNC_003366 2
146Clostridium phytofermentans ISDg chromosomeNC_010001 2
147Clostridium tetani E88 chromosomeNC_004557 3
148Clostridium thermocellum ATCC 27405 chromosomeNC_009012 6
149Colwellia psychrerythraea 34H chromosomeNC_003910 1
150Corynebacterium diphtheriae NCTC 13129 chromosomeNC_002935 2
151Corynebacterium efficiens YS-314 chromosomeNC_004369 4
152Corynebacterium glutamicum ATCC 13032 chromosomeNC_003450 2
153Corynebacterium glutamicum R chromosomeNC_009342 2
154Corynebacterium urealyticum DSM 7109 chromosomeNC_010545 1
155Coxiella burnetii RSA 331 chromosomeNC_010117 7
156Coxiella burnetii RSA 493 chromosomeNC_002971 7
157Cronobacter sakazakii ATCC BAA-894 chromosomeNC_009778 10
158Cupriavidus metallidurans CH34 chromosomeNC_007973 7
159Cupriavidus taiwanensis LMG 19424 chromosomeNC_010528 10
160Cyanothece sp. ATCC 51142 chromosomeNC_010546 41
161Cyanothece sp. PCC 7425 chromosomeNC_011884 1
162Cyanothece sp. PCC 8802 chromosomeNC_013161 1
163Cytophaga hutchinsonii ATCC 33406 chromosomeNC_008255 8
164Dechloromonas aromatica RCB chromosomeNC_007298 3
165Dehalococcoides mccartyi 195 chromosomeNC_002936 1
166Dehalococcoides mccartyi BAV1 chromosomeNC_009455 1
167Dehalococcoides mccartyi CBDB1 chromosomeNC_007356 1
168Deinococcus geothermalis DSM 11300 chromosomeNC_008025 2
169Deinococcus radiodurans R1 chromosomeNC_001263 8 [1 experimental]
170Delftia acidovorans SPH-1 chromosomeNC_010002 22
171Desulfitobacterium hafniense DCB-2 chromosomeNC_011830 2
172Desulfitobacterium hafniense Y51 chromosomeNC_007907 7
173Desulfococcus oleovorans Hxd3 chromosomeNC_009943 27
174Desulfomicrobium baculatum DSM 4028 chromosomeNC_013173 1
175Desulfotalea psychrophila LSv54 chromosomeNC_006138 3
176Desulfotomaculum reducens MI-1 chromosomeNC_009253 17
177Desulfovibrio alaskensis G20 chromosomeNC_007519 2
178Desulfovibrio vulgaris DP4 chromosomeNC_008751 4
179Desulfovibrio vulgaris str. Hildenborough chromosomeNC_002937 5
180Dichelobacter nodosus VCS1703A chromosomeNC_009446 5
181Dickeya dadantii Ech703 chromosomeNC_012880 1
182Dickeya zeae Ech1591 chromosomeNC_012912 1
183Dictyoglomus turgidum DSM 6724 chromosomeNC_011661 1
184Dinoroseobacter shibae DFL 12 = DSM 16493 chromosomeNC_009952 3
185Dyadobacter fermentans DSM 18053 chromosomeNC_013037 1
186Enterobacter sp. 638 chromosomeNC_009436 6
187Enterococcus faecalis V583 chromosomeNC_004668 14 [1 experimental]
188Erythrobacter litoralis HTCC2594 chromosomeNC_007722 5
189Escherichia coli 536 chromosomeNC_008253 13
190Escherichia coli APEC O1 chromosomeNC_008563 7
191Escherichia coli ATCC 8739 chromosomeNC_010468 10
192Escherichia coli BL21(DE3) chromosomeNC_012892 2
193Escherichia coli BW25113 chromosomeNZ_CP009273 1 [1 experimental]
194Escherichia coli BW2952 chromosomeNC_012759 3 [2 experimental]
195Escherichia coli CFT073 chromosomeNC_004431 13
196Escherichia coli DH1 chromosomeNC_017638 1
197Escherichia coli E24377A chromosomeNC_009801 2
198Escherichia coli EC302/04 chromosomeCP011493 5
199Escherichia coli HS chromosomeNC_009800 11
200Escherichia coli IAI39 chromosomeNC_011750 1
201Escherichia coli K-12 strain ER3413 chromosomeCP009789 4 [4 experimental]
202Escherichia coli O157:H7 str. EDL933 chromosomeNC_002655 15 [3 experimental]
203Escherichia coli O157:H7 str. Sakai chromosomeNC_002695 16
204Escherichia coli SMS-3-5 chromosomeNC_010498 13
205Escherichia coli str. K-12 substr. DH10B chromosomeNC_010473 15 [4 experimental]
206Escherichia coli str. K-12 substr. MC4100 chromosomeHG738867 4 [4 experimental]
207Escherichia coli str. K-12 substr. MDS42 chromosomeNC_020518 4 [4 experimental]
208Escherichia coli str. K-12 substr. MG1655 chromosomeNC_000913 32 [27 experimental]
209Escherichia coli str. K-12 substr. W3110 chromosomeNC_007779 4 [4 experimental]
210Exiguobacterium sibiricum 255-15 chromosomeNC_010556 2
211Finegoldia magna ATCC 29328 chromosomeNC_010376 4
212Flavobacterium johnsoniae UW101 chromosomeNC_009441 7
213Francisella novicida U112 chromosomeNC_008601 1
214Francisella philomiragia subsp. philomiragia ATCC 25017 chromosomeNC_010336 2
215Francisella tularensis subsp. holarctica FTNF002-00 chromosomeNC_009749 1
216Francisella tularensis subsp. holarctica LVS chromosomeNC_007880 1
217Francisella tularensis subsp. holarctica OSU18 chromosomeNC_008369 1
218Francisella tularensis subsp. mediasiatica FSC147 chromosomeNC_010677 1
219Francisella tularensis subsp. tularensis FSC198 chromosomeNC_008245 1
220Francisella tularensis subsp. tularensis SCHU S4 chromosomeNC_006570 1
221Frankia alni ACN14a chromosomeNC_008278 15
222Frankia sp. CcI3 chromosomeNC_007777 32
223Frankia sp. EAN1pec chromosomeNC_009921 17
224Fusobacterium nucleatum subsp. nucleatum ATCC 25586 chromosomeNC_003454 6
225Geobacillus kaustophilus HTA426 chromosomeNC_006510 6
226Geobacillus thermodenitrificans NG80-2 chromosomeNC_009328 2
227Geobacter bemidjiensis Bem chromosomeNC_011146 11
228Geobacter lovleyi SZ chromosomeNC_010814 24
229Geobacter metallireducens GS-15 chromosomeNC_007517 17
230Geobacter sulfurreducens PCA chromosomeNC_002939 7
231Geobacter uraniireducens Rf4 chromosomeNC_009483 75
232Gloeobacter violaceus PCC 7421 chromosomeNC_005125 64
233Gluconobacter oxydans 621H chromosomeNC_006677 2
234Gramella forsetii KT0803 chromosomeNC_008571 9
235Granulibacter bethesdensis CGDNIH1 chromosomeNC_008343 3
236Haemophilus ducreyi 35000HP chromosomeNC_002940 1
237Haemophilus influenzae 86-028NP chromosomeNC_007146 9
238Haemophilus influenzae PittEE chromosomeNC_009566 10
239Haemophilus influenzae PittGG chromosomeNC_009567 6
240Haemophilus influenzae Rd KW20 chromosomeNC_000907 9 [1 experimental]
241Haemophilus somnus 129PT chromosomeNC_008309 8
242Haemophilus somnus 2336 chromosomeNC_010519 9
243Hahella chejuensis KCTC 2396 chromosomeNC_007645 7
244Haloarcula marismortui ATCC 43049 chromosomeNC_006396 6
245Halobacterium salinarum R1 chromosomeNC_010364 3
246Haloquadratum walsbyi DSM 16790 chromosomeNC_008212 10
247Halorhodospira halophila SL1 chromosomeNC_008789 10
248Helicobacter hepaticus ATCC 51449 chromosomeNC_004917 1
249Helicobacter pylori 26695 chromosomeNC_000915 4 [2 experimental]
250Helicobacter pylori HPAG1 chromosomeNC_008086 1
251Helicobacter pylori J99 chromosomeNC_000921 2
252Heliobacterium modesticaldum Ice1 chromosomeNC_010337 2
253Herminiimonas arsenicoxydans chromosomeNC_009138 3
254Herpetosiphon aurantiacus DSM 785 chromosomeNC_009972 1
255Hydrogenobaculum sp. Y04AAS1 chromosomeNC_011126 5
256Hyperthermus butylicus DSM 5456 chromosomeNC_008818 14
257Hyphomonas neptunium ATCC 15444 chromosomeNC_008358 3
258Idiomarina loihiensis L2TR chromosomeNC_006512 11
259Ignicoccus hospitalis KIN4/I chromosomeNC_009776 1
260Jannaschia sp. CCS1 chromosomeNC_007802 8
261Janthinobacterium sp. Marseille chromosomeNC_009659 4
262Kineococcus radiotolerans SRS30216 = ATCC BAA-149 chromosomeNC_009664 6
263Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosomeNC_009648 8
264Kocuria rhizophila DC2201 chromosomeNC_010617 4
265Lactobacillus acidophilus NCFM chromosomeNC_006814 4
266Lactobacillus casei ATCC 334 (Lactobacillus paracasei ATCC 334) chromosomeNC_008526 2
267Lactobacillus casei BL23 chromosomeNC_010999 8
268Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 chromosomeNC_008054 1
269Lactobacillus fermentum IFO 3956 chromosomeNC_010610 1
270Lactobacillus gasseri ATCC 33323 chromosomeNC_008530 9
271Lactobacillus helveticus DPC 4571 chromosomeNC_010080 4
272Lactobacillus johnsonii NCC 533 chromosomeNC_005362 6
273Lactobacillus plantarum plasmid pCD033 plasmidKP718939 1
274Lactobacillus plantarum WCFS1 chromosomeNC_004567 6
275Lactobacillus reuteri DSM 20016 chromosomeNC_009513 4
276Lactobacillus reuteri JCM 1112 chromosomeNC_010609 2
277Lactobacillus rhamnosus ATCC 8530 chromosomeNC_017491 6
278Lactobacillus rhamnosus GG chromosomeNC_013198 1
279Lactobacillus rhamnosus GG chromosomeNC_017482 1
280Lactobacillus rhamnosus Lc 705 chromosomeNC_013199 5
281Lactobacillus sakei subsp. sakei 23K chromosomeNC_007576 1
282Lactobacillus salivarius UCC118 chromosomeNC_007929 5
283Lactococcus lactis plasmid pSRQ900AF001314 1 [1 experimental]
284Lactococcus lactis subsp. cremoris MG1363 chromosomeNC_009004 5
285Lactococcus lactis subsp. cremoris SK11 chromosomeNC_008527 3
286Lactococcus lactis subsp. lactis Il1403 chromosomeNC_002662 5
287Legionella pneumophila str. Corby chromosomeNC_009494 6
288Legionella pneumophila str. Lens chromosomeNC_006369 8
289Leifsonia xyli subsp. xyli str. CTCB07 chromosomeNC_006087 2
290Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) chromosomeNC_010842 22
291Leptospira borgpetersenii serovar Hardjo-bovis str. L550 chromosomeNC_008508 7
292Leptospira interrogans serovar Lai str. 56601 chromosomeNC_004342 5
293Leptothrix cholodnii SP-6 chromosomeNC_010524 16
294Leuconostoc citreum KM20 chromosomeNC_010471 1
295Listeria innocua Clip11262 chromosomeNC_003212 5
296Listeria monocytogenes EGD-e chromosomeNC_003210 2
297Listeria monocytogenes serotype 4b str. F2365 chromosomeNC_002973 1
298Listeria welshimeri serovar 6b str. SLCC5334 chromosomeNC_008555 2
299Magnetococcus marinus MC-1 chromosomeNC_008576 16
300Magnetospirillum magneticum AMB-1 chromosomeNC_007626 6
301Mannheimia succiniciproducens MBEL55E chromosomeNC_006300 1
302Maricaulis maris MCS10 chromosomeNC_008347 13
303Marinomonas sp. MWYL1 chromosomeNC_009654 18
304Mesorhizobium loti MAFF303099 chromosomeNC_002678 20
305Metallosphaera sedula DSM 5348 chromosomeNC_009440 15
306Methanobrevibacter smithii ATCC 35061 chromosomeNC_009515 1
307Methanocaldococcus jannaschii DSM 2661 chromosomeNC_000909 14
308Methanocella arvoryzae MRE50 chromosomeNC_009464 8
309Methanococcus aeolicus Nankai-3 chromosomeNC_009635 1
310Methanococcus maripaludis C5 chromosomeNC_009135 3
311Methanococcus maripaludis C6 chromosomeNC_009975 5
312Methanococcus maripaludis C7 chromosomeNC_009637 2
313Methanococcus maripaludis S2 chromosomeNC_005791 2
314Methanococcus vannielii SB chromosomeNC_009634 2
315Methanocorpusculum labreanum Z chromosomeNC_008942 1
316Methanoculleus marisnigri JR1 chromosomeNC_009051 20
317Methanoregula boonei 6A8 chromosomeNC_009712 12
318Methanosarcina acetivorans C2A chromosomeNC_003552 22
319Methanosarcina barkeri str. Fusaro chromosomeNC_007355 7
320Methanosarcina mazei Go1 chromosomeNC_003901 19
321Methanosphaera stadtmanae DSM 3091 chromosomeNC_007681 1
322Methanospirillum hungatei JF-1 chromosomeNC_007796 34
323Methanothermobacter thermautotrophicus str. Delta H chromosomeNC_000916 3
324Methylacidiphilum infernorum V4 chromosomeNC_010794 1
325Methylibium petroleiphilum PM1 chromosomeNC_008825 8
326Methylobacillus flagellatus KT chromosomeNC_007947 2
327Methylobacterium extorquens PA1 chromosomeNC_010172 13
328Methylobacterium populi BJ001 chromosomeNC_010725 43
329Methylobacterium radiotolerans JCM 2831 chromosomeNC_010505 6
330Methylobacterium sp. 4-46 chromosomeNC_010511 8
331Methylococcus capsulatus str. Bath chromosomeNC_002977 5
332Microcystis aeruginosa NIES-843 chromosomeNC_010296 113
333Moorella thermoacetica ATCC 39073 chromosomeNC_007644 28
334Mycobacterium abscessus chromosomeNC_010397 8
335Mycobacterium avium 104 chromosomeNC_008595 2
336Mycobacterium avium subsp. paratuberculosis K-10 chromosomeNC_002944 3
337Mycobacterium bovis AF2122/97 chromosomeNC_002945 57
338Mycobacterium bovis BCG str. Pasteur 1173P2 chromosomeNC_008769 58
339Mycobacterium gilvum PYR-GCK chromosomeNC_009338 6
340Mycobacterium smegmatis str. MC2 155 chromosomeNC_008596 5 [2 experimental]
341Mycobacterium sp. JLS chromosomeNC_009077 8
342Mycobacterium sp. KMS chromosomeNC_008705 6
343Mycobacterium sp. MCS chromosomeNC_008146 5
344Mycobacterium tuberculosis CDC1551 chromosomeNC_002755 57
345Mycobacterium tuberculosis F11 chromosomeNC_009565 46
346Mycobacterium tuberculosis H37Ra chromosomeNC_009525 57
347Mycobacterium tuberculosis H37Rv chromosomeNC_000962 76 [32 experimental]
348Mycobacterium ulcerans Agy99 chromosomeNC_008611 2
349Mycobacterium vanbaalenii PYR-1 chromosomeNC_008726 14
350Myxococcus xanthus DK 1622 chromosomeNC_008095 4
351Natranaerobius thermophilus JW/NM-WN-LF chromosomeNC_010718 10
352Natronomonas pharaonis DSM 2160 chromosomeNC_007426 5
353Neisseria gonorrhoeae FA 1090 chromosomeNC_002946 3
354Neisseria gonorrhoeae NCCP11945 chromosomeNC_011035 7
355Neisseria meningitidis 053442 chromosomeNC_010120 5
356Neisseria meningitidis FAM18 chromosomeNC_008767 4
357Neisseria meningitidis MC58 chromosomeNC_003112 6
358Nitratiruptor sp. SB155-2 chromosomeNC_009662 11
359Nitrobacter winogradskyi Nb-255 chromosomeNC_007406 12
360Nitrosococcus oceani ATCC 19707 chromosomeNC_007484 32
361Nitrosomonas europaea ATCC 19718 chromosomeNC_004757 51 [1 experimental]
362Nitrosomonas eutropha C91 chromosomeNC_008344 11
363Nitrosospira multiformis ATCC 25196 chromosomeNC_007614 8
364Nocardia farcinica IFM 10152 chromosomeNC_006361 17
365Nocardioides sp. JS614 chromosomeNC_008699 5
366Nostoc punctiforme PCC 73102 (Nostoc punctiforme ATCC 29133) chromosomeNC_010628 26
367Nostoc sp. PCC 7120 (Anabaena sp. PCC 7120) chromosomeNC_003272 49
368Novosphingobium aromaticivorans DSM 12444 chromosomeNC_007794 4
369Oceanobacillus iheyensis HTE831 chromosomeNC_004193 3
370Ochrobactrum anthropi ATCC 49188 chromosomeNC_009667 8
371Opitutus terrae PB90-1 chromosomeNC_010571 1
372Parabacteroides distasonis ATCC 8503 chromosomeNC_009615 8
373Paracoccus denitrificans PD1222 chromosomeNC_008686 9
374Parvibaculum lavamentivorans DS-1 chromosomeNC_009719 23
375Pectobacterium atrosepticum SCRI1043 chromosomeNC_004547 19
376Pectobacterium carotovorum subsp. carotovorum PC1 chromosomeNC_012917 1
377Pediococcus pentosaceus ATCC 25745 chromosomeNC_008525 3
378Pelobacter carbinolicus DSM 2380 chromosomeNC_007498 9
379Pelodictyon phaeoclathratiforme BU-1 chromosomeNC_011060 67
380Pelotomaculum thermopropionicum SI chromosomeNC_009454 25
381Petrotoga mobilis SJ95 chromosomeNC_010003 3
382Photobacterium profundum SS9 chromosomeNC_006371 7
383Photorhabdus luminescens subsp. laumondii TTO1 chromosomeNC_005126 66 [1 experimental]
384Picrophilus torridus DSM 9790 chromosomeNC_005877 2
385Polaromonas naphthalenivorans CJ2 chromosomeNC_008781 16
386Polaromonas sp. JS666 chromosomeNC_007948 17
387Porphyromonas gingivalis W83 chromosomeNC_002950 2
388Propionibacterium acnes KPA171202 chromosomeNC_006085 3
389Prosthecochloris aestuarii DSM 271 chromosomeNC_011059 5
390Proteus mirabilis HI4320 chromosomeNC_010554 10
391Pseudoalteromonas atlantica T6c chromosomeNC_008228 2
392Pseudoalteromonas haloplanktis TAC125 chromosomeNC_007481 3
393Pseudomonas aeruginosa PA1 chromosomeNC_022808 20
394Pseudomonas aeruginosa PA7 chromosomeNC_009656 7
395Pseudomonas aeruginosa PAO1 chromosomeNC_002516 4
396Pseudomonas aeruginosa UCBPP-PA14 chromosomeNC_008463 6
397Pseudomonas entomophila L48 chromosomeNC_008027 12
398Pseudomonas fluorescens Pf0-1 chromosomeNC_007492 8
399Pseudomonas mendocina ymp chromosomeNC_009439 7
400Pseudomonas protegens Pf-5 chromosomeNC_004129 12
401Pseudomonas putida F1 chromosomeNC_009512 7
402Pseudomonas putida GB-1 chromosomeNC_010322 5
403Pseudomonas putida KT2440 chromosomeNC_002947 14
404Pseudomonas putida KT2440 chromosomeAE015451 1
405Pseudomonas putida W619 chromosomeNC_010501 7
406Pseudomonas stutzeri A1501 chromosomeNC_009434 5
407Pseudomonas syringae pv. phaseolicola 1448A chromosomeNC_005773 6
408Pseudomonas syringae pv. syringae B728a chromosomeNC_007005 8
409Pseudomonas syringae pv. tomato str. DC3000 chromosomeNC_004578 15
410Psychrobacter arcticus 273-4 chromosomeNC_007204 4
411Psychrobacter cryohalolentis K5 chromosomeNC_007969 1
412Psychromonas ingrahamii 37 chromosomeNC_008709 3
413Pyrobaculum aerophilum str. IM2 chromosomeNC_003364 27 [2 experimental]
414Pyrobaculum arsenaticum DSM 13514 chromosomeNC_009376 31
415Pyrobaculum calidifontis JCM 11548 chromosomeNC_009073 7
416Pyrobaculum islandicum DSM 4184 chromosomeNC_008701 7
417Pyrobaculum neutrophilum V24Sta chromosomeNC_010525 5
418Pyrococcus abyssi GE5 chromosomeNC_000868 14
419Pyrococcus furiosus DSM 3638 chromosomeNC_003413 14
420Pyrococcus horikoshii OT3 chromosomeNC_000961 13
421Ralstonia eutropha JMP134 chromosomeNC_007348 2
422Ralstonia pickettii 12D chromosomeNC_012856 1
423Ralstonia pickettii 12J chromosomeNC_010678 2
424Ralstonia solanacearum GMI1000 chromosomeNC_003295 10
425Renibacterium salmoninarum ATCC 33209 chromosomeNC_010168 5
426Rhizobium etli CFN 42 chromosomeNC_007761 8
427Rhizobium etli CIAT 652 chromosomeNC_010994 14
428Rhodobacter sphaeroides ATCC 17025 chromosomeNC_009428 2
429Rhodobacter sphaeroides ATCC 17029 chromosomeNC_009049 1
430Rhodobacter sphaeroides ATCC 17029 chromosomeNC_009050 4
431Rhodococcus jostii RHA1 chromosomeNC_008268 12
432Albidiferax ferrireducens T118 (Rhodoferax ferrireducens T118) chromosomeNC_007908 6
433Rhodopirellula baltica SH 1 chromosomeNC_005027 5
434Rhodopseudomonas palustris BisA53 chromosomeNC_008435 33
435Rhodopseudomonas palustris BisB18 chromosomeNC_007925 48
436Rhodopseudomonas palustris BisB5 chromosomeNC_007958 20
437Rhodopseudomonas palustris CGA009 chromosomeNC_005296 18
438Rhodopseudomonas palustris HaA2 chromosomeNC_007778 24
439Rhodopseudomonas palustris TIE-1 chromosomeNC_011004 24
440Rhodospirillum rubrum ATCC 11170 chromosomeNC_007643 34
441Rickettsia akari str. Hartford chromosomeNC_009881 10
442Rickettsia bellii OSU 85-389 chromosomeNC_009883 22
443Rickettsia bellii RML369-C chromosomeNC_007940 21
444Rickettsia canadensis str. McKiel chromosomeNC_009879 1
445Rickettsia conorii str. Malish 7 chromosomeNC_003103 16
446Rickettsia felis URRWXCal2 chromosomeNC_007109 25
447Rickettsia massiliae MTU5 chromosomeNC_009900 9
448Rickettsia rickettsii str. Iowa chromosomeNC_010263 12
449Rickettsia rickettsii str. Sheila Smith chromosomeNC_009882 12
450Roseiflexus castenholzii DSM 13941 chromosomeNC_009767 37
451Roseiflexus sp. RS-1 chromosomeNC_009523 41
452Roseobacter denitrificans OCh 114 chromosomeNC_008209 1
453Rubrobacter xylanophilus DSM 9941 chromosomeNC_008148 2
454Ruegeria pomeroyi DSS-3 chromosomeNC_003911 1
455Ruegeria sp. TM1040 chromosomeNC_008044 2
456Saccharophagus degradans 2-40 chromosomeNC_007912 8
457Saccharopolyspora erythraea NRRL 2338 chromosomeNC_009142 31
458Salinibacter ruber DSM 13855 chromosomeNC_007677 13
459Salinispora arenicola CNS-205 chromosomeNC_009953 29
460Salinispora tropica CNB-440 chromosomeNC_009380 28
461Salmonella enterica arizonae serovar 62 z4 z23 RSK2980 chromosomeNC_010067 8
462Serratia proteamaculans 568 chromosomeNC_009832 23
463Shewanella amazonensis SB2B chromosomeNC_008700 2
464Shewanella baltica OS185 chromosomeNC_009665 9
465Shewanella baltica OS195 chromosomeNC_009997 7
466Shewanella denitrificans OS217 chromosomeNC_007954 3
467Shewanella frigidimarina NCIMB 400 chromosomeNC_008345 2
468Shewanella halifaxensis HAW-EB4 chromosomeNC_010334 2
469Shewanella loihica PV-4 chromosomeNC_009092 1
470Shewanella oneidensis MR-1 chromosomeNC_004347 6 [1 experimental]
471Shewanella pealeana ATCC 700345 chromosomeNC_009901 1
472Shewanella putrefaciens CN-32 chromosomeNC_009438 10
473Shewanella sediminis HAW-EB3 chromosomeNC_009831 2
474Shewanella sp. ANA-3 chromosomeNC_008577 2
475Shewanella sp. MR-4 chromosomeNC_008321 2
476Shewanella sp. MR-7 chromosomeNC_008322 4
477Shewanella sp. W3-18-1 chromosomeNC_008750 6
478Shewanella woodyi ATCC 51908 chromosomeNC_010506 7
479Shigella boydii CDC 3083-94 chromosomeNC_010658 3
480Shigella dysenteriae Sd197 chromosomeNC_007606 9
481Shigella flexneri 2a str. 2457T chromosomeNC_004741 4
482Shigella flexneri 2a str. 301 chromosomeNC_004337 6
483Shigella flexneri 5 str. 8401 chromosomeNC_008258 3
484Shigella sonnei Ss046 chromosomeNC_007384 7
485Sinorhizobium meliloti 1021 chromosomeNC_003047 24 [1 experimental]
486Sorangium cellulosum So ce56 chromosomeNC_010162 16
487Sphingomonas wittichii RW1 chromosomeNC_009511 18
488Sphingopyxis alaskensis RB2256 chromosomeNC_008048 12
489Staphylococcus aureus RF122 chromosomeNC_007622 4
490Staphylococcus aureus subsp. aureus COL chromosomeNC_002951 4
491Staphylococcus aureus subsp. aureus MRSA252 chromosomeNC_002952 3
492Staphylococcus aureus subsp. aureus MSSA476 chromosomeNC_002953 4
493Staphylococcus aureus subsp. aureus Mu3 chromosomeNC_009782 4
494Staphylococcus aureus subsp. aureus Mu50 chromosomeNC_002758 4
495Staphylococcus aureus subsp. aureus MW2 chromosomeNC_003923 4
496Staphylococcus aureus subsp. aureus N315 chromosomeNC_002745 4 [4 experimental]
497Staphylococcus aureus subsp. aureus NCTC 8325 chromosomeNC_007795 3
498Staphylococcus aureus subsp. aureus str. Newman chromosomeNC_009641 1 [1 experimental]
499Staphylococcus aureus subsp. aureus USA300 TCH1516 chromosomeNC_010079 5
500Staphylococcus epidermidis ATCC 12228 chromosomeNC_004461 1
501Staphylococcus epidermidis RP62A chromosomeNC_002976 2
502Staphylococcus haemolyticus JCSC1435 chromosomeNC_007168 3
503Staphylothermus marinus F1 chromosomeNC_009033 9
504Stenotrophomonas maltophilia K279a chromosomeNC_010943 9
505Stenotrophomonas maltophilia R551-3 chromosomeNC_011071 6
506Streptococcus agalactiae 2603V/R chromosomeNC_004116 8 [1 experimental]
507Streptococcus agalactiae A909 chromosomeNC_007432 3
508Streptococcus agalactiae NEM316 chromosomeNC_004368 3
509Streptococcus equi subsp. zooepidemicus MGCS10565 chromosomeNC_011134 2
510Streptococcus mutans UA159 chromosomeNC_004350 4 [1 experimental]
511Streptococcus pneumoniae CGSP14 chromosomeNC_010582 5
512Streptococcus pneumoniae D39 chromosomeNC_008533 3
513Streptococcus pneumoniae G54 chromosomeNC_011072 5
514Streptococcus pneumoniae gamPNI0373 chromosomeNC_018630 1
515Streptococcus pneumoniae Hungary19A-6 chromosomeNC_010380 9
516Streptococcus pneumoniae R6 chromosomeNC_003098 6 [2 experimental]
517Streptococcus pneumoniae TIGR4 chromosomeNC_003028 7
518Streptococcus pyogenes MGAS10270 chromosomeNC_008022 10
519Streptococcus pyogenes MGAS10394 chromosomeNC_006086 4
520Streptococcus pyogenes MGAS10750 chromosomeNC_008024 6
521Streptococcus pyogenes MGAS2096 chromosomeNC_008023 3
522Streptococcus pyogenes MGAS315 chromosomeNC_004070 7
523Streptococcus pyogenes MGAS5005 chromosomeNC_007297 4
524Streptococcus pyogenes MGAS6180 chromosomeNC_007296 7
525Streptococcus pyogenes MGAS8232 chromosomeNC_003485 8
526Streptococcus pyogenes MGAS9429 chromosomeNC_008021 5
527Streptococcus pyogenes M1 GAS chromosomeNC_002737 5
528Streptococcus pyogenes SSI-1 chromosomeNC_004606 7
529Streptococcus pyogenes str. Manfredo chromosomeNC_009332 8
530Streptococcus sanguinis SK36 chromosomeNC_009009 1
531Streptococcus suis 05ZYH33 chromosomeNC_009442 4 [1 experimental]
532Streptococcus suis 98HAH33 chromosomeNC_009443 3
533Streptococcus suis SC070731 chromosomeCP003922 1
534Streptococcus suis SC84 chromosomeNC_012924 1 [1 experimental]
535Streptococcus thermophilus CNRZ1066 chromosomeNC_006449 1
536Streptococcus thermophilus LMG 18311 chromosomeNC_006448 1
537Streptomyces avermitilis MA-4680 = NBRC 14893 chromosomeNC_003155 27
538Streptomyces cattleya NRRL 8057 = DSM 46488 chromosomeNC_017586 1 [1 experimental]
539Streptomyces coelicolor A3(2) chromosomeNC_003888 22 [1 experimental]
540Streptomyces griseus subsp. griseus NBRC 13350 (Streptomyces) chromosomeNC_010572 14
541Sulfolobus acidocaldarius DSM 639 chromosomeNC_007181 11
542Sulfolobus solfataricus P2 chromosomeNC_002754 16
543Sulfolobus tokodaii str. 7 chromosomeNC_003106 37
544Sulfurihydrogenibium sp. YO3AOP1 chromosomeNC_010730 3
545Sulfurimonas denitrificans DSM 1251 chromosomeNC_007575 6
546Sulfurovum sp. NBC37-1 chromosomeNC_009663 12
547Symbiobacterium thermophilum IAM 14863 chromosomeNC_006177 2
548Synechococcus elongatus PCC 6301 (Synechococcus leopoliensis SAG) chromosomeNC_006576 9
549Synechococcus elongatus PCC 7942 chromosomeNC_007604 11
550Synechococcus sp. CC9311 chromosomeNC_008319 3
551Synechococcus sp. JA-3-3Ab chromosomeNC_007775 1
552Synechococcus sp. WH 7803 chromosomeNC_009481 1
553Synechococcus sp. WH 8102 chromosomeNC_005070 12
554Synechocystis sp. PCC 6803 chromosomeNC_000911 19 [3 experimental]
555Synechocystis sp. PCC 6803 chromosomeNC_017277 3
556Syntrophobacter fumaroxidans MPOB chromosomeNC_008554 6
557Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 chromosomeNC_008346 35
558Syntrophus aciditrophicus SB chromosomeNC_007759 7
559Thauera sp. MZ1T chromosomeNC_011662 2
560Thermoanaerobacter pseudethanolicus ATCC 33223 chromosomeNC_010321 15
561Thermoanaerobacter sp. X514 chromosomeNC_010320 11
562Thermoanaerobacter tengcongensis MB4 (Caldanaerobacter subterraneus) chromosomeNC_003869 15
563Thermobifida fusca YX chromosomeNC_007333 8
564Thermococcus kodakarensis KOD1 chromosomeNC_006624 49
565Thermofilum pendens Hrk 5 chromosomeNC_008698 25
566Thermosipho melanesiensis BI429 chromosomeNC_009616 1
567Thermosynechococcus elongatus BP-1 chromosomeNC_004113 1
568Thermotoga lettingae TMO chromosomeNC_009828 1
569Thermotoga maritima MSB8 chromosomeNC_000853 5 [2 experimental]
570Thermotoga petrophila RKU-1 chromosomeNC_009486 2
571Thermotoga sp. RQ2 chromosomeNC_010483 2
572Thermus thermophilus HB27 chromosomeNC_005835 12
573Thermus thermophilus HB8 chromosomeNC_006461 18
574Thioalkalivibrio sulfidophilus HL-EbGr7 chromosomeNC_011901 2
575Thiobacillus denitrificans ATCC 25259 chromosomeNC_007404 7
576Treponema denticola ATCC 35405 chromosomeNC_002967 37
577Trichodesmium erythraeum IMS101 chromosomeNC_008312 6
578Variovorax paradoxus S110 chromosomeNC_012791 1
579Variovorax paradoxus S110 chromosomeNC_012792 1
580Verminephrobacter eiseniae EF01-2 chromosomeNC_008786 40
581Vibrio cholerae MJ-1236 chromosomeNC_012668 1 [1 experimental]
582Vibrio cholerae O1 biovar El Tor str. N16961 chromosomeNC_002506 16 [16 experimental]
583Vibrio cholerae O395 chromosomeNC_009456 11
584Vibrio cholerae O395 chromosomeNC_009457 1
585Vibrio fischeri ES114 chromosomeNC_006840 1
586Vibrio fischeri MJ11 chromosomeNC_011184 3
587Vibrio campbellii ATCC BAA-1116 chromosomeNC_009783 2
588Vibrio parahaemolyticus RIMD 2210633 chromosomeNC_004603 7
589Vibrio vulnificus CMCP6 chromosomeNC_004459 9
590Vibrio vulnificus YJ016 chromosomeNC_005140 1
591Wolbachia endosymbiont of Drosophila melanogaster chromosomeNC_002978 6
592Xanthobacter autotrophicus Py2 chromosomeNC_009720 11
593Xanthomonas axonopodis pv. citri str. 306 chromosomeNC_003919 12
594Xanthomonas campestris pv. campestris str. 8004 chromosomeNC_007086 8
595Xanthomonas campestris pv. campestris str. ATCC 33913 chromosomeNC_003902 7
596Xanthomonas campestris pv. campestris str. B100 chromosomeNC_010688 7
597Xanthomonas oryzae KACC10331 chromosomeNC_006834 7
598Xanthomonas oryzae pv. oryzae MAFF 311018 chromosomeNC_007705 9
599Xanthomonas oryzae pv. oryzae PXO99A chromosomeNC_010717 8
600Xanthomonas oryzae pv. oryzicola BLS256 chromosomeNC_017267 1 [1 experimental]
601Xenorhabdus nematophila ATCC 19061 chromosomeNC_014228 1
602Xylella fastidiosa 9a5c chromosomeNC_002488 19 [1 experimental]
603Xylella fastidiosa M12 chromosomeNC_010513 10
604Xylella fastidiosa M23 chromosomeNC_010577 12
605Xylella fastidiosa Temecula1 chromosomeNC_004556 12
606Yersinia enterocolitica subsp. enterocolitica 8081 chromosomeNC_008800 13
607Yersinia pestis Antiqua chromosomeNC_008150 9
608Yersinia pestis biovar Microtus str. 91001 chromosomeNC_005810 13
609Yersinia pestis KIM10+ chromosomeNC_004088 5
610Yersinia pestis Nepal516 chromosomeNC_008149 9
611Yersinia pseudotuberculosis IP 32953 chromosomeNC_006155 9
612Yersinia pseudotuberculosis PB1/+ chromosomeNC_010634 9
613Yersinia pseudotuberculosis YPIII chromosomeNC_010465 7
Total 5635 [145 experimental]

experimental Number of TAs that are from experimental literatures