TADB
Browse by organism | type II  or  its classification  | type I | type III  | type IV | type V  | type VI

At the heart of TADB is this ‘Browse by organism’ page that provides a hyperlinked organized catalog of over 900 prokaryotic genomes with TA systems identified. TADB provides an web-interface, allowing users to view an entire genome’s TA loci repertoire within the context of the whole replicon and to access individual pages dedicated to each TA locus pair, toxin and antitoxin as required.

Alphabet A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
Full list Plasmid list Chromosome list
Only TA-containing replicons are listed

#Repliconascending1descending1NCBI accession no. TApair numberascending2descending2
1Parabacteroides distasonis ATCC 8503 chromosomeNC_009615 8
2Paracoccus aminophilus strain JCM 7686 plasmid pAMI2, completeNC_010847 1
3Paracoccus aminophilus strain JCM 7686 plasmid pAMI7, completeNC_014832 1
4Paracoccus denitrificans PD1222 chromosomeNC_008686 9
5Parvibaculum lavamentivorans DS-1 chromosomeNC_009719 23
6Pectobacterium atrosepticum plasmid pECA1039, complete sequence.NC_011767 1 [1 experimental]
7Pectobacterium atrosepticum SCRI1043 chromosomeNC_004547 19
8Pectobacterium carotovorum subsp. carotovorum PC1 chromosomeNC_012917 1
9Pediococcus pentosaceus ATCC 25745 chromosomeNC_008525 3
10Pedobacter sp. BG5 plasmid pMWHK1, complete sequence.NC_012033 1
11Pelobacter carbinolicus DSM 2380 chromosomeNC_007498 9
12Pelobacter propionicus DSM 2379 plasmid pPRO2NC_008608 3
13Pelodictyon phaeoclathratiforme BU-1 chromosomeNC_011060 67
14Pelotomaculum thermopropionicum SI chromosomeNC_009454 25
15Petrotoga mobilis SJ95 chromosomeNC_010003 3
16Phenylobacterium zucineum HLK1 plasmid unnamedNC_011143 3
17Photobacterium profundum SS9 chromosomeNC_006371 7
18Photobacterium profundum SS9 plasmid pPBPR1NC_005871 1
19Photorhabdus luminescens subsp. laumondii TTO1 chromosomeNC_005126 66 [1 experimental]
20Picrophilus torridus DSM 9790 chromosomeNC_005877 2
21Polaromonas naphthalenivorans CJ2 chromosomeNC_008781 16
22Polaromonas naphthalenivorans CJ2 plasmid pPNAP01NC_008757 3
23Polaromonas naphthalenivorans CJ2 plasmid pPNAP02NC_008758 1
24Polaromonas naphthalenivorans CJ2 plasmid pPNAP04NC_008760 2
25Polaromonas naphthalenivorans CJ2 plasmid pPNAP05NC_008761 2
26Polaromonas naphthalenivorans CJ2 plasmid pPNAP06NC_008762 1
27Polaromonas sp. JS666 chromosomeNC_007948 17
28Polaromonas sp. JS666 plasmid 1NC_007949 2
29Polaromonas sp. JS666 plasmid 2NC_007950 6
30Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 NC_009379 5
31Porphyromonas gingivalis W83 chromosomeNC_002950 2
32Propionibacterium acnes KPA171202 chromosomeNC_006085 3
33Prosthecochloris aestuarii DSM 271 chromosomeNC_011059 5
34Proteus mirabilis HI4320 chromosomeNC_010554 10
35Proteus mirabilis HI4320 plasmid pHI4320NC_010555 1
36Proteus vulgaris plasmid Rts1 DNA, complete sequence.NC_003905 1 [1 experimental]
37Providencia rettgeri plasmid pPrY2001KF295828 1
38Pseudoalteromonas atlantica T6c chromosomeNC_008228 2
39Pseudoalteromonas haloplanktis TAC125 chromosomeNC_007481 3
40Pseudomonas aeruginosa PA1 chromosomeNC_022808 20
41Pseudomonas aeruginosa PA7 chromosomeNC_009656 7
42Pseudomonas aeruginosa PAO1 chromosomeNC_002516 4
43Pseudomonas aeruginosa plasmid pNOR-2000KC189475 2
44Pseudomonas aeruginosa UCBPP-PA14 chromosomeNC_008463 6
45Pseudomonas entomophila L48 chromosomeNC_008027 12
46Pseudomonas fluorescens Pf0-1 chromosomeNC_007492 8
47Pseudomonas mendocina ymp chromosomeNC_009439 7
48Pseudomonas protegens Pf-5 chromosomeNC_004129 12
49Pseudomonas putida F1 chromosomeNC_009512 7
50Pseudomonas putida GB-1 chromosomeNC_010322 5
51Pseudomonas putida KT2440 chromosomeNC_002947 14
52Pseudomonas putida KT2440 chromosomeAE015451 1
53Pseudomonas putida W619 chromosomeNC_010501 7
54Pseudomonas stutzeri A1501 chromosomeNC_009434 5
55Pseudomonas syringae pv. phaseolicola 1448A chromosomeNC_005773 6
56Pseudomonas syringae pv. phaseolicola 1448A plasmid largeplasmidNC_007274 6
57Pseudomonas syringae pv. phaseolicola 1448A plasmid smallplasmidNC_007275 3
58Pseudomonas syringae pv. syringae B728a chromosomeNC_007005 8
59Pseudomonas syringae pv. tomato str. DC3000 chromosomeNC_004578 15
60Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000ANC_004633 1
61Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000BNC_004632 3
62Psychrobacter arcticus 273-4 chromosomeNC_007204 4
63Psychrobacter cryohalolentis K5 chromosomeNC_007969 1
64Psychrobacter cryohalolentis K5 plasmid 1NC_007968 2
65Psychrobacter sp. PRwf-1 plasmid pRWF101NC_009516 1
66Psychromonas ingrahamii 37 chromosomeNC_008709 3
67Pyrobaculum aerophilum str. IM2 chromosomeNC_003364 27 [2 experimental]
68Pyrobaculum arsenaticum DSM 13514 chromosomeNC_009376 31
69Pyrobaculum calidifontis JCM 11548 chromosomeNC_009073 7
70Pyrobaculum islandicum DSM 4184 chromosomeNC_008701 7
71Pyrobaculum neutrophilum V24Sta chromosomeNC_010525 5
72Pyrococcus abyssi GE5 chromosomeNC_000868 14
73Pyrococcus furiosus DSM 3638 chromosomeNC_003413 14
74Pyrococcus horikoshii OT3 chromosomeNC_000961 13
Total 624 [5 experimental]

experimental Number of TAs that are from experimental literatures