TADB
Synechocystis sp. PCC 6803 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3573470
Link to NCBI Taxonomy Browser by Tax_id :1148
 
# TA INFO in replicon: NC_000911
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 sll1400 ssl2733 - 48067..48635 -/COG2442-PIN
2 2 slr0725 slr0724 - 110392..111224 relBE/AbrB-RelE
3 2 ssr1766 ssr1765 - 382392..382873 hicBA/HicB-HicA
4 2 ssl2923 ssl2922 - 473953..474432 vapBC/AbrB-PIN
5 2 sll1504 sll1505 - 475110..475743 -/HEPN-MNT
6 experimental 2 slr1767 ssr2962 - 545029..545588 -/COG2442-PIN
7 2 sll1912 ssl3615 - 775687..776342 vapBC/-
8 2 slr1210 slr1209 - 893261..893972 -/COG2442-PIN
9 2 sll1715 sll1714 - 968487..969294 vapBC/-
10 2 sll1130 ssl2245 - 1048406..1049016 mazEF/-
11 2 ssl2749 sll1411 - 1617376..1618096 -/HEPN-MNT
12 2 slr1327 ssr2201 - 1660069..1660711 vapBC/-
13 2 sll1225 ssl2420 - 1673585..1674298 vapBC/-
14 experimental 2 sll1092 ssl2138 - 1933468..1934060 vapBC/Xre-PIN
15 2 slr0771 slr0770 - 2394232..2394871 -/COG2442-PIN
16 2 sll0690 ssl1300 - 2631207..2631868 vapBC */AbrB-PIN
17 2 sll0658 ssl1255 - 3121193..3121953 vapBC */COG2886-PIN
18 2 sll0525 ssl1004 - 3262064..3262749 vapBC/PHD-PIN
19 experimental 2 slr0664 ssr1114 - 3347941..3348553 relBE/-

experimental TA derived from experimental literature

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1ssl2138-68.13sll1092PIN72.55NC_000911
2ssl2922VagC88.92sll0690VapC/PIN89.19NC_000911
3ssl2245-66.32sll1130PemK/MazF73.2NC_000911
4ssl3615-60.32sll1912PIN71.71NC_000911
5ssl2420-67.93sll1225COG4113/COG1848/PIN71.01NC_000911
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.