TADB
Lactococcus lactis subsp. lactis Il1403 chromosome, complete chromosome

# GENOME INFO
Genome size (bp) : 2365589
Link to NCBI Taxonomy Browser by Tax_id :272623
 
# TA INFO in replicon: NC_002662
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 L38253 L38687 - 1038491..1039467 -/Xre-COG2856
2 2 L39625 L39394 - 1039635..1040633 -/Xre-Bro
3 2 L52331 L53055 - 1452584..1453547 -/Xre-Bro
4 2 L53979 L53427 - 1453713..1454831 -/Xre-COG2856
5 2 L198048 L197116 - 2013685..2014913 ygiT-mqsR (relBE) */Xre-YgiU

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1L61369HTH_XRE/HTH_XRE/HTH_3/HipB74.32L61641-64.23NC_002662
2L60929-67.16L61369HTH_XRE/HTH_XRE/HTH_3/HipB74.32NC_002662
3L41144-67.68L41422HTH_XRE/HTH_XRE/HTH_3/HipB78.15NC_002662
4L41422HTH_XRE/HTH_XRE/HTH_3/HipB78.15L41670-60.16NC_002662
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.