TADB
Escherichia coli O157:H7 str. Sakai chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5498450
Link to NCBI Taxonomy Browser by Tax_id :386585
 
# TA INFO in replicon: NC_002695
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 ECs0053 ECs0052 - 54802..55352 ccd/RHH-MazF
2 2 ECs0252 ECs0253 - 283928..284467 relBE/RHH-RelE
3 2 ECs0462 ECs0461 - 494256..494772 parDE/RHH-RelE
4 2 ECs5400 ECs5399 - 1001067..1001772 relBE */Xre-RelE
5 2 ECs1067 ECs1068 ECs1069 1167455..1167933 paaR-paaA-parE/RHH-RelE
6 2 ECs2281 ECs2280 ECs2279 2248879..2249386 paaR-paaA-parE/RHH-RelE
7 2 ECs2869 ECs2870 - 2814935..2815553 higBA/COG5606-RelE
8 2 ECs3642 ECs3643 - 3633155..3633738 mazEF/AbrB-MazF
9 2 ECs3965 ECs3964 - 3973359..3974086 relBE */Xre-RelE
10 2 ECs4008 ECs4007 - 4016237..4017036 prlF-yhaV/AbrB-RelE
11 2 ECs4212 ECs4213 - 4210767..4211526 -/YhfG-Fic
12 2 ECs4262 ECs4261 - 4267959..4268719 -/RHH-GNAT
13 2 ECs4307 ECs4308 - 4316849..4317649 -/RHH-GNAT
14 2 ECs4357 ECs4356 - 4359452..4360083 hicBA/HicB-HicA
15 2 ECs4597 ECs4598 - 4628307..4628967 relBE */Xre-RelE
16 2 ECs5203 ECs5202 - 5303921..5304522 mazEF/AbrB-MazF

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1ECs0461COG360987.17ECs0462ParE/Plasmid_stabil92.27NC_002695
2ECs1068-61.42ECs1067ParE/Plasmid_stabil79.76NC_002695
3ECs1068-61.42ECs1069HTH_XRE/HTH_XRE/HTH_3/HipB/VapI75.15NC_002695
4ECs1508-60.55ECs1507HTH_XRE/VapI71.95NC_002695
5ECs0462ParE/Plasmid_stabil92.27ECs0463-62.42NC_002695
6ECs1071-60.16ECs1070HipB/HTH_XRE/HTH_XRE/HTH_373.42NC_002695
7ECs3274HTH_XRE/HTH_XRE/HTH_382.13ECs3275HTH_XRE/HTH_XRE/HTH_3/HipB82.89NC_002695
8ECs2280-66.68ECs2281ParE/Plasmid_stabil80.05NC_002695
9ECs2277-62.19ECs2278HTH_3/HTH_XRE/HTH_XRE/VapI75.15NC_002695
10ECs0260-64.1ECs0259StbD78.59NC_002695
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.