TADB
Caulobacter crescentus CB15 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4016947
Link to NCBI Taxonomy Browser by Tax_id :190650
 
# TA INFO in replicon: NC_002696
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 CC_0031 CC_0032 - 34312..34938 vapBC/AbrB-PIN
2 2 CC_0489 CC_0488 - 510247..510775 -/RHH-COG2929
3 2 CC_0802 CC_0803 - 890690..891231 relBE/RHH-RelE
4 2 CC_0841 CC_0842 - 937775..938759 vapBC */AbrB-PIN
5 experimental 2 CC_0873 CC_0874 - 968678..969231 parDE/RHH-RelE
6 2 CC_2513 CC_2514 - 2718990..2719444 relBE/RHH-RelE
7 2 CC_2735 CC_2736 - 2951498..2953683 hipBA */Xre-HipA
8 2 CC_2756 CC_2757 - 2970970..2972207 relBE */Xre-RelE
9 2 CC_2770 CC_2771 - 2984310..2985973 hipBA */Xre-HipA
10 2 CC_2880 CC_2879 - 3102768..3103396 RelBE or parDE */RHH-RelE
11 2 CC_2984 CC_2985 - 3202309..3202882 parDE/RHH-RelE
12 2 CC_3038 CC_3037 - 3254923..3255440 higBA/Xre-RelE
13 2 CC_3080 CC_3079 - 3308820..3309459 -/HEPN-MNT
14 2 CC_3184 CC_3185 - 3430829..3431417 hicBA/-

experimental TA derived from experimental literature

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1CC_2706HTH_XRE/HTH_XRE/HTH_3/HipB/COG5499/VapI89.64CC_2705HTH_XRE/HTH_XRE/HTH_3/HipB/VapI90.61NC_002696
2CC_0842AbrB/SpoVT_AbrB62.91CC_0841PIN82.64NC_002696
3CC_2514-64.87CC_2513Plasmid_stabil/ParE80.13NC_002696
4CC_0874COG360984.15CC_0873ParE/Plasmid_stabil93.51NC_002696
5CC_0803HTH_490.1CC_0802Plasmid_stabil/ParE91.71NC_002696
6CC_2879-62.77CC_2880Plasmid_stabil/ParE79.44NC_002696
7CC_2769-62.71CC_2770HipA85.4NC_002696
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.