TADB
Mycobacterium tuberculosis CDC1551 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4403837
Link to NCBI Taxonomy Browser by Tax_id :83331
 
# TA INFO in replicon: NC_002755
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 MT0254 MT0253 - 289218..289896 vapBC */RHH-PIN
2 2 MT0289 MT0290 - 332822..333447 vapBC/RHH-PIN
3 2 MT0574 MT0575 - 641680..642356 vapBC/RHH-PIN
4 2 MT0625 MT0626 - 696287..696933 vapBC/PHD-PIN
5 2 MT0628 MT0629 - 698602..699275 vapBC/AbrB-PIN
6 2 MT0638 MT0637 - 704690..705333 vapBC/RHH-PIN
7 2 MT0646 MT0645.2 - 712228..712853 vapBC/RHH-PIN
8 2 MT0652 MT0651 - 717856..718505 vapBC/RHH-PIN
9 2 MT0685 MT0686 - 754957..755590 vapBC/RHH-PIN
10 2 MT0688 MT0689 - 756658..757204 mazEF/RHH-MazF
11 2 MT0690 MT0691 - 757308..758122 vapBC/RHH-PIN
12 2 MT0693 MT0692.1 - 760536..761112 vapBC/PHD-PIN
13 2 MT0773 MT0772.6 - 843079..843797 vapBC/RHH-PIN
14 2 MT0945 MT0944 - 1024164..1025197 -/RHH-GNAT
15 2 MT0988 MT0987 - 1073340..1073941 vapBC/-
16 2 MT1134 MT1135 - 1230207..1230754 mazEF/-
17 2 MT1144 MT1143.1 - 1238964..1239532 vapBC/RHH-PIN
18 2 MT1280 MT1279 - 1383730..1384454 vapBC/RHH-PIN
19 2 MT1441 MT1442 - 1573969..1574636 vapBC/RHH-PIN
20 2 MT1542 MT1541 - 1686427..1687043 mazEF/-
21 2 MT1612 MT1611 - 1764909..1765537 vapBC/RHH-PIN
22 2 MT1761 MT1762 - 1937832..1938445 vapBC/RHH-PIN
23 2 MT1783 MT1782 - 1958563..1959023 vapBC/RHH-PIN
24 2 MT1886 MT1887 - 2084483..2085138 vapBC/RHH-PIN
25 2 MT2003 MT2002 - 2198046..2198581 vapBC/RHH-PIN
26 2 MT2004 MT2005 - 2198916..2199919 relBE */Xre-RelE
27 2 MT2008 MT2009 - 2201013..2201557 parDE/RHH-RelE
28 2 MT2012 MT2013 - 2202198..2202881 vapBC/PHD-PIN
29 2 MT2034 MT2035 - 2222746..2223434 vapBC/RHH-PIN
30 2 MT2043 MT2044 - 2230072..2230970 -/COG5642-COG5654
31 2 MT2046 MT2047 - 2231638..2232224 mazEF/RHH-MazF
32 2 MT2065 MT2064.1 - 2255363..2256004 vapBC/RHH-PIN
33 2 MT2075 MT2074 - 2262544..2263738 -/COG2442-PIN
34 2 MT2078 MT2077 - 2264138..2265057 relBE */Xre-RelE
35 2 MT2095 MT2094 - 2283480..2284435 -/ArsR-COG3832
36 2 MT2123 MT2122 - 2323164..2323800 mazEF, ccd or relBE */RHH-MazF
37 2 MT2163 MT2164 - 2366353..2367048 vapBC/RHH-PIN
38 2 MT2200 MT2201 - 2400885..2401414 parDE/-
39 2 MT2569 MT2568 - 2803571..2804223 vapBC/RHH-PIN
40 2 MT2602 MT2601.2 - 2846578..2847203 vapBC/RHH-PIN
41 2 MT2605 MT2606 - 2849754..2850394 vapBC/RHH-PIN
42 2 MT2622 MT2621 - 2863928..2864712 vapBC/RHH-PIN
43 2 MT2624 MT2623 - 2864736..2865382 vapBC/RHH-PIN
44 2 MT2677 MT2676 - 2926214..2926928 vapBC/RHH-PIN
45 2 MT2722 MT2721 - 2964554..2965222 mazEF */XF1863-MazF
46 2 MT2827 MT2828 - 3064893..3065572 vapBC/RHH-PIN
47 2 MT2829 MT2830 - 3065598..3066259 vapBC/RHH-PIN
48 2 MT2932 MT2931 - 3168957..3169528 vapBC/-
49 2 MT3271 MT3272 - 3546888..3547777 vapBC */PHD-PIN
50 2 MT3274 MT3275 - 3548068..3548678 relBE */Xre-RelE
51 2 MT3277 MT3276 - 3549216..3550180 -/Xre-COG5654
52 2 MT3421 MT3422 - 3702530..3703204 vapBC/RHH-PIN
53 2 MT3466 MT3465 - 3762997..3763526 relBE/PHD-RelE
54 2 MT3492 MT3493 - 3790118..3790818 vapBC/PHD-PIN
55 2 MT3516 MT3515 - 3817129..3817835 vapBC/PHD-PIN
56 2 MT3799 MT3800 - 4132060..4132718 vapBC/RHH-PIN
57 2 MT3856 MT3857 - 4189942..4190911 -/MerR-PIN

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1MT2931-61.52MT2932COG1848/PIN71NC_002755
2MT1279-64.13MT1280COG1848/PIN70.73NC_002755
3MT2568-64.19MT2569COG184870.6NC_002755
4MT1143.1-67.1MT1144VapC/PIN/COG184873.44NC_002755
5MT2164-67.97MT2163COG1848/PIN/VapC71.52NC_002755
6MT1887-67.68MT1886COG1848/PIN73.62NC_002755
7MT0689-65MT0688PemK/MazF73.6NC_002755
8MT1611-63.81MT1612PIN/VapC/COG184873.74NC_002755
9MT0694-62.68MT0693VapC/PIN73.03NC_002755
10MT2047HTH_486.9MT2046PemK/MazF88.67NC_002755
11MT0645.2-64.87MT0646COG1848/PIN/VapC73.98NC_002755
12MT1442HTH_487.15MT1441VapC/PIN/COG184887.18NC_002755
13MT0290-61.26MT0289COG1848/PIN/VapC70.9NC_002755
14MT2591HTH_3/HTH_XRE/HTH_XRE/HipB63.05MT2590VapC/PIN83.69NC_002755
15MT1135COG360985.64MT1134PemK/MazF88.14NC_002755
16MT2601.2-64.87MT2602VapC/PIN74.75NC_002755
17MT2064.1-60.97MT2065PIN/VapC/COG184874.85NC_002755
18MT2623HTH_486.05MT2622VapC/PIN86.5NC_002755
19MT2623HTH_486.05MT2624VapC/PIN/COG184886.81NC_002755
20MT0313-65.71MT0312HTH_475.44NC_002755
21MT1541-61MT1542PemK/MazF76.27NC_002755
22MT1993-60.58MT1992PemK/MazF75.18NC_002755
23MT1762-62.68MT1761COG4113/PIN74.13NC_002755
24MT0253-67.16MT0254COG1848/PIN71.27NC_002755
25MT0987-67.1MT0988COG4113/PIN73.33NC_002755
26MT2828-63.06MT2827VapC/PIN/COG184873.22NC_002755
27MT2076-62.64MT2077HTH_XRE/HTH_XRE/HTH_3/HipB72.56NC_002755
28MT2009COG360988.69MT2008Plasmid_stabil/ParE92.63NC_002755
29MT0638PIN/VapC87.5MT0638.1-68.39NC_002755
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.