TADB
Bordetella parapertussis 12822 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4773551
Link to NCBI Taxonomy Browser by Tax_id :257311
 
# TA INFO in replicon: NC_002928
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 BPP0380 BPP0379 - 399399..400198 -/RHH-GNAT
2 2 BPP0524 BPP0523 - 553890..555529 hipBA */Xre-HipA
3 2 BPP0645 BPP0646 - 683617..685358 hipBA */Xre-HipA
4 2 BPP1335 BPP1334 - 1437470..1438389 -/ArsR-COG3832
5 2 BPP1402 BPP1403 - 1504557..1505218 vapBC/RHH-PIN
6 2 BPP1954 BPP1953 - 2091210..2091741 -/RHH-COG2929
7 2 BPP2078 BPP2077 - 2225388..2225982 hicBA/HicB-HicA
8 2 BPP2743 BPP2744 - 2939253..2939866 higBA/Xre-RelE
9 2 BPP2765 BPP2764 - 2963801..2965515 hipBA */Xre-HipA
10 2 BPP2839 BPP2838 - 3037264..3037940 relBE */Xre-RelE
11 2 BPP2927 BPP2928 - 3139480..3140495 -/COG5642-COG5654
12 2 BPP2998 BPP2999 - 3225182..3225591 relBE */Xre-RelE
13 2 BPP3141 BPP3142 - 3381447..3382083 hicBA/-

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1BPP3141COG172480.68BPP3140-60.97NC_002928
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.