TADB
Streptococcus pneumoniae R6 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 2038615
Link to NCBI Taxonomy Browser by Tax_id :171101
 
# TA INFO in replicon: NC_003098
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 spr0253 spr0252 - 255567..256101 relBE/RHH-RelE
2 experimental 2 spr0952 spr0951 - 934826..936120 hicBA/-
3 experimental 2 spr1103 spr1104 - 1104862..1105420 relBE/RHH-RelE
4 2 spr1585 spr1586 - 1566450..1567001 relBE/PHD-RelE
5 2 spr1613 spr1612 - 1587345..1588040 hicBA/HicB-HicA
6 2 spr1752 spr1753 - 1721344..1721710 -/Xre-COG2856

experimental TA derived from experimental literature

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1spr1104-65.71spr1103RelE80.45NC_003098
2spr1278-60.45spr1279HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.8NC_003098
3spr1928-61.74spr1929HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.32NC_003098
4spr0300-66.22spr0301HTH_XRE/HTH_XRE/HTH_3/VapI/HipB72.77NC_003098
5spr1929HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.32spr1930-60.52NC_003098
6spr1612COG159880.97spr1613COG172482.23NC_003098
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.