TADB
Ralstonia solanacearum GMI1000 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3716413
Link to NCBI Taxonomy Browser by Tax_id :267608
 
# TA INFO in replicon: NC_003295
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 RSc0124 RSc0125 - 147209..147887 relBE */Xre-RelE
2 2 RSc0263 RSc0264 - 295750..296452 relBE or parDE */PHD-RelE
3 2 RSc0871 RSc0872 - 904468..905129 vapBC/PHD-PIN
4 2 RSc0992 RSc0993 - 1043865..1045324 -/ArsR-COG3832
5 2 RSc1446 RSc1447 - 1548504..1550099 hipBA */Xre-HipA
6 2 RSc1959 RSc1960 - 2137893..2139192 -/ArsR-COG3832
7 2 RSc3055 RSc3056 - 3292237..3292870 vapBC/AbrB-PIN
8 2 RSc3133 RSc3132 - 3378843..3380100 -/Xre-GNAT
9 2 RSc3224 RSc3225 - 3486222..3486787 relBE/RHH-RelE
10 2 RSc3279 RSc3278 - 3528939..3529509 relBE/Xre-RelE

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1RSc3278HTH_XRE/HTH_XRE/HTH_3/HipB86.49RSc3279RelE93.55NC_003295
2RSc0872Phd/StbD64.05RSc0871VapC/PIN/COG184875.44NC_003295
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.