TADB
Methanosarcina acetivorans C2A chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5751492
Link to NCBI Taxonomy Browser by Tax_id :188937
 
# TA INFO in replicon: NC_003552
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 MA0049 MA0048 - 59191..59735 relBE/RHH-RelE
2 2 MA0100 MA0101 - 126603..127279 -/HEPN-MNT
3 2 MA0173 MA0174 - 207902..208726 -/HEPN-MNT
4 2 MA0376 MA0375 - 442147..442679 relBE/RHH-RelE
5 2 MA0480 MA0481 - 560781..561753 vapBC */COG2886-PIN
6 2 MA0765 MA0764 - 897175..897698 hicBA/HicB-HicA
7 2 MA0766 MA0767 - 897937..898580 -/HEPN-MNT
8 2 MA1295 MA1296 - 1553607..1554274 -/HEPN-MNT
9 2 MA1515 MA1514 - 1791919..1792550 vapBC/RHH-PIN
10 2 MA1694 MA1693 - 2033512..2033981 relBE/-
11 2 MA1853 MA1852 - 2283947..2284830 -/HEPN-MNT
12 2 MA2131 MA2130 - 2636168..2636821 -/HEPN-MNT
13 2 MA2135 MA2136 - 2639527..2639967 hicBA/-
14 2 MA2160 MA2159 - 2668859..2669329 relBE/RHH-RelE
15 2 MA2376 MA2377 - 2941685..2942283 -/HEPN-MNT
16 2 MA2618 MA2617 - 3246294..3247261 -/HEPN-MNT
17 2 MA2815 MA2814 - 3512424..3513610 -/RHH-GNAT
18 2 MA3426 MA3427 - 4229746..4230733 vapBC/-
19 2 MA3500 MA3499 - 4336973..4337493 relBE/-
20 2 MA4126 MA4125 - 5043454..5043915 hicBA/HicB-HicA
21 2 MA4280 MA4281 - 5201813..5202391 relBE/RHH-RelE
22 2 MA4418 MA4417 - 5453482..5454721 -/HEPN-MNT

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1MA2136COG159886.22MA2135COG172487.68NC_003552
2MA4125COG159883.81MA4126COG172486.22NC_003552
3MA2135COG172487.68MA2134COG159885.26NC_003552
4MA0375-63.1MA0376RelE80.5NC_003552
5MA4281-62.68MA4280RelE79.43NC_003552
6MA2277-63.55MA4668HTH_XRE/HTH_XRE/HTH_3/HipB/VapI79.33NC_003552
7MA3499-66.22MA3500RelE79.08NC_003552
8MA1693-62.55MA1694RelE/Plasmid_stabil/ParE79.01NC_003552
9MA1514-65.35MA1515VapC/PIN/COG184877.1NC_003552
10MA2159-68.29MA2160RelE72.07NC_003552
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.