TADB
Methanosarcina mazei Go1 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4096345
Link to NCBI Taxonomy Browser by Tax_id :192952
 
# TA INFO in replicon: NC_003901
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 MM_0023 MM_0022 - 26685..27182 hicBA/HicB-HicA
2 2 MM_0032 MM_0031 - 36332..36829 hicBA/HicB-HicA
3 2 MM_0160 MM_0161 - 207711..208152 hicBA/HicB-HicA
4 2 MM_0187 MM_0188 - 260231..260886 -/HEPN-MNT
5 2 MM_0207 MM_0208 - 282909..283896 vapBC/-
6 2 MM_0549 MM_0550 - 676921..677563 phd-doc/-
7 2 MM_1160 MM_1161 - 1380238..1381088 -/HEPN-MNT
8 2 MM_1163 MM_1164 - 1383102..1383766 -/HEPN-MNT
9 2 MM_1472 MM_1473 - 1755935..1756763 -/HEPN-MNT
10 2 MM_1664 MM_1665 - 1991143..1992218 vapBC */COG2886-PIN
11 2 MM_1867 MM_1868 - 2218665..2219149 relBE/RHH-RelE
12 2 MM_1924 MM_1923 - 2287321..2287763 hicBA/HicB-HicA
13 2 MM_2472 MM_2473 - 2951609..2952501 -/HEPN-MNT
14 2 MM_2549 MM_2550 - 3034989..3035493 relBE/RHH-RelE
15 2 MM_2600 MM_2599 - 3096421..3096893 relBE/-
16 2 MM_2605 MM_2604 - 3102338..3102807 relBE/RHH-RelE
17 2 MM_2608 MM_2607 - 3104448..3105115 -/HEPN-MNT
18 2 MM_2658 MM_2657 - 3175787..3177070 -/RHH-GNAT
19 2 MM_2680 MM_2681 - 3205117..3205646 relBE/RHH-RelE

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1MM_0031COG159882.42MM_0032COG172484.32NC_003901
2MM_2599-67.68MM_2600RelE79.41NC_003901
3MM_0928-63.19MM_0927HTH_XRE/HTH_XRE/HTH_3/HipB/VapI79.28NC_003901
4MM_2681-63.61MM_2680RelE79.18NC_003901
5MM_0550-67.55MM_0549Doc/DOC74.99NC_003901
6MM_1868-67.9MM_1867RelE74.56NC_003901
7MM_2550-66.22MM_2549RelE/Plasmid_stabil/HigB74.55NC_003901
8MM_2896-64.1MM_2895HTH_XRE/HTH_XRE/HTH_3/HipB/VapI73.26NC_003901
9MM_2604-68.29MM_2605RelE93.72NC_003901
10MM_0022COG159882.42MM_0023COG172484.32NC_003901
11MM_2605RelE93.72MM_2606Doc/DOC61.36NC_003901
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.