TADB
Shewanella oneidensis MR-1 plasmid megaplasmid, complete sequence. plasmid megaplasmid

# GENOME INFO
Genome size (bp) : 161613
Link to NCBI Taxonomy Browser by Tax_id :211586
 
# TA INFO in replicon: NC_004349
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SO_A0022 SO_A0023 - 18774..19453 relBE */Xre-RelE
2 2 SO_A0060 SO_A0059 - 48737..49558 -/RHH-GNAT
3 2 SO_A0069 SO_A0068 - 55521..56140 relBE */Xre-RelE
4 2 SO_A0072 SO_A0071 - 57546..58279 relBE */Xre-RelE
5 2 SO_A0079 SO_A0078 - 61181..61715 RelBE or parDE */RHH-RelE
6 2 SO_A0088 SO_A0087 - 67295..67866 relBE or parDE */PHD-RelE
7 2 SO_A0152 SO_A0185 - 139838..140268 relBE */Xre-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SO_A0040-68.29SO_A0041MazF/PemK75.63NC_004349
2SO_A0087StbD/Phd87.56SO_A0088ParE/Plasmid_stabil90.1NC_004349
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.