TADB
Vibrio vulnificus CMCP6 chromosome I, complete sequence. chromosome

# GENOME INFO
Genome size (bp) : 3281866
Link to NCBI Taxonomy Browser by Tax_id :216895
 
# TA INFO in replicon: NC_004459
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 VV1_0110 VV1_0111 - 100190..100724 RelBE or parDE */RHH-RelE
2 2 VV1_0401 VV1_0402 - 391909..393737 hipBA */Xre-HipA
3 2 VV1_2047 VV1_2046 - 2039434..2040995 hipBA */Xre-HipA
4 2 VV1_2190 VV1_2191 - 2196978..2198626 hipBA */Xre-HipA
5 2 VV1_2410 VV1_2409 - 2450674..2451221 relBE/PHD-RelE
6 2 VV1_2433 VV1_2432 - 2475060..2475607 relBE/PHD-RelE
7 2 VV1_2525 VV1_2526 - 2570316..2570854 parDE/RHH-RelE
8 2 VV1_2537 VV1_2538 - 2579980..2580746 -/RHH-GNAT
9 2 VV1_2547 VV1_2546 - 2586584..2587149 relBE/PHD-RelE

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1VV1_2496-60.03VV1_2497HTH_XRE/HTH_XRE/HTH_3/HipB/VapI70.36NC_004459
2VV1_2526COG360990.63VV1_2525ParE/Plasmid_stabil92.28NC_004459
3VV1_0111-64.64VV1_0110RelE74.79NC_004459
4VV1_2546StbD90.84VV1_2547Plasmid_stabil/ParE92.15NC_004459
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.