TADB
Bradyrhizobium japonicum USDA 110 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 9105828
Link to NCBI Taxonomy Browser by Tax_id :224911
 
# TA INFO in replicon: NC_004463
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 bll0069 bll0070 - 61639..62552 -/Xre-COG2856
2 2 blr0610 blr0609 - 653599..654295 -/ArsR-COG3832
3 2 blr0847 blr0846 - 910878..911761 -/ArsR-COG3832
4 2 blr1116 blr1115 - 1229348..1230450 -/Xre-GNAT
5 2 bll1668 bll1669 - 1827442..1828646 -/Xre-COG2856
6 2 bll1687 bll1688 - 1844759..1845621 relBE/AbrB-RelE
7 2 bll1985 bsl1986 - 2140149..2141719 hipBA */Xre-HipA
8 2 blr2113 blr2114 - 2290882..2291684 higBA (relBE) */COG5606-RelE
9 experimental 2 bll2434 bsl2435 - 2652602..2653308 vapBC/PHD-PIN
10 2 bsl3012 bll3011 - 3325314..3325915 higBA/Xre-RelE
11 2 blr4003 blr4004 - 4441977..4443001 -/ArsR-COG3832
12 2 bll5290 bll5291 - 5841907..5842826 -/ArsR-COG3832
13 2 blr5653 blr5652 - 6215114..6215904 -/ArsR-COG3832
14 2 blr6751 blr6750 - 7434334..7435085 -/ArsR-COG3832
15 2 blr7360 blr7359 - 8097332..8098109 -/ArsR-COG3832

experimental TA derived from experimental literature

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1bll3011VapI/HTH_XRE/HTH_XRE/HTH_387.87bsl3012HigB/Plasmid_killer93.1NC_004463
2bsr8246-62.97bsr8245HTH_3/HTH_XRE/HTH_XRE/VapI71.97NC_004463
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.