TADB
Xylella fastidiosa Temecula1 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 2519802
Link to NCBI Taxonomy Browser by Tax_id :183190
 
# TA INFO in replicon: NC_004556
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 PD0368 PD0369 - 457594..458161 higBA/Xre-RelE
2 2 PD0370 PD0371 - 458249..458955 ygiT-mqsR (relBE) */Xre-YgiU
3 2 PD0960 PD0961 - 1164162..1164718 parDE/-
4 2 PD0967 PD0968 - 1167816..1168420 higBA (relBE) */COG5606-RelE
5 2 PD0982 PD0983 - 1178562..1179178 higBA (relBE) */COG5606-RelE
6 2 PD0998 PD0997 - 1200081..1200672 -/RHH-COG2929
7 2 PD1100 PD1099 - 1298233..1298764 RelBE or parDE */RHH-RelE
8 2 PD1176 PD1177 - 1379511..1380122 higBA/Xre-RelE
9 2 PD1184 PD1183 - 1383077..1383623 relBE/RHH-RelE
10 2 PD1340 PD1341 - 1566872..1567462 higBA/Xre-RelE
11 2 PD1343 PD1342 - 1567642..1568228 hicBA/HicB-HicA
12 2 PD1716 PD1717 - 2006879..2007534 -/HEPN-MNT

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1PD0961-62.9PD0960Plasmid_stabil/ParE77.1NC_004556
2PD0917-62.42PD0918HTH_3/HTH_XRE70.32NC_004556
3PD1183HTH_486.69PD1184RelE93.73NC_004556
4PD1340HigB/Plasmid_killer92.57PD0369VapI/HTH_XRE/HTH_XRE/HTH_3/COG549993.45NC_004556
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.