TADB
Salmonella enterica subsp. enterica serovar Typhi str. Ty2

# GENOME INFO
Genome size (bp) : 4791961
Link to NCBI Taxonomy Browser by Tax_id :209261
 
# TA INFO in replicon: NC_004631
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 t1909 t1910 - 1959704..1960499 phd-doc/-
2 2 t2805 t2804 - 2883562..2884376 -/RHH-GNAT
3 2 t2943 t2944 - 3037295..3037920 vapBC/AbrB-PIN
4 2 t3392 t3391 - 3492921..3493621 higBA/COG5606-RelE
5 2 t3587 t3588 - 3688752..3689374 vapBC/RHH-PIN
6 2 t3590 t3591 - 3690588..3691342 relBE */Xre-RelE
7 2 t3868 t3867 - 3995426..3996186 -/RHH-GNAT
8 2 t4035 t4034 - 4193136..4193895 -/YhfG-Fic
9 2 t4224 t4223 - 4391683..4392464 -/RHH-GNAT
10 2 t4359 t4358 - 4513030..4513808 -/RHH-GNAT
11 2 t4484 t4483 - 4630414..4630930 relBE/RHH-RelE
12 2 t4578 t4579 - 4732926..4733502 -/RHH-COG2929

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1t4483RelB90.8t4484RelE93.38NC_004631
2t0443HTH_XRE/HTH_XRE/HTH_383.25t0444HTH_XRE/HTH_XRE84.07NC_004631
3t1910-67.97t1909Doc/DOC72.39NC_004631
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.