TADB
Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, plasmid pDC3000B

# GENOME INFO
Genome size (bp) : 67473
Link to NCBI Taxonomy Browser by Tax_id :223283
 
# TA INFO in replicon: NC_004632
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 PSPTO_B0018 PSPTO_B0019 - 18458..19167 vapBC */RHH-PIN
2 2 PSPTO_B0025 PSPTO_B0026 - 23792..24417 higBA (relBE) */COG5606-RelE
3 2 PSPTO_B0073 PSPTO_B0074 - 62879..63453 vapBC */RHH-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1PSPTO_B0074-67.55PSPTO_B0073VapC/PIN/COG184873.31NC_004632
2PSPTO_B0026HTH_XRE/VapI/HTH_XRE78.02PSPTO_B0027-60.29NC_004632
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.