TADB
Enterococcus faecalis V583 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3218031
Link to NCBI Taxonomy Browser by Tax_id :226185
 
# TA INFO in replicon: NC_004668
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 EF0128 EF0129 - 132769..133788 -/Xre-COG2856
2 2 EF0137 EF0138 - 137142..137847 -/HEPN-MNT
3 2 EF0305 EF0306 - 291290..292349 -/Xre-COG2856
4 2 EF0379 EF0380 - 348247..348902 phd-doc/AbrB-Fic
5 2 EF0513 EF0512 - 474678..475212 relBE/RHH-RelE
6 2 EF1276 EF1277 - 1245337..1246339 -/Xre-COG2856
7 2 EF1421 EF1422 - 1401182..1401990 -/Xre-COG2856
8 2 EF2041 EF2040 - 1959510..1960506 -/Xre-COG2856
9 2 EF2143 EF2142 - 2045101..2045937 -/Xre-COG2856
10 2 EF2535 EF2534 - 2456085..2456769 -/HEPN-MNT
11 2 EF2545 EF2544 - 2460151..2461043 -/Xre-COG2856
12 2 EF2853 EF2852 - 2733991..2734686 -/Xre-COG2856
13 2 EF3262 EF3261 - 3139616..3140201 mazEF/AbrB-MazF
14 experimental 1 EF_3263 EF_3263a - 3140274..3140739 pasABC/-

experimental TA derived from experimental literature

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1EF2127-63EF2126COG442372.12NC_004668
2EF0380-65.35EF0379Doc/DOC74.44NC_004668
3EF0308-64.03EF0307HTH_XRE/HTH_3/HTH_XRE/HipB/VapI78.44NC_004668
4EF2038-63.93EF2039HTH_XRE71NC_004668
5EF2345-62.64EF2344RelB72.09NC_004668
6EF1894-62.68EF1893RelB71.85NC_004668
7EF2126COG442372.12EF2125-66.68NC_004668
8EF1424-61EF1423HTH_XRE/HTH_3/HTH_XRE/HipB78.61NC_004668
9EF2137-60.48EF2138HTH_XRE/HTH_3/HTH_XRE/VapI78.59NC_004668
10EF2138HTH_XRE/HTH_3/HTH_XRE/VapI78.59EF2139-60.1NC_004668
11EF0318-60.32EF0317HTH_XRE/HTH_XRE/HTH_3/HipB72.05NC_004668
12EF0317HTH_XRE/HTH_XRE/HTH_3/HipB72.05EF0316-67.68NC_004668
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.