TADB
Shigella flexneri 2a str. 2457T, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4599354
Link to NCBI Taxonomy Browser by Tax_id :198215
 
# TA INFO in replicon: NC_004741
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 S4812 S0373 - 378572..379416 -/RHH-GNAT
2 2 S1669 S1670 - 1620096..1620622 relBE/RHH-RelE
3 2 S3330 S3329 - 3212629..3213356 relBE */Xre-RelE
4 2 S4383 S4382 - 4311874..4312633 -/YhfG-Fic

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1S1668-65.26S1669RelE93.46NC_004741
2S2200-68.35S2201StbD81.2NC_004741
3S2603HTH_XRE/HTH_XRE/HTH_382.13S2604HTH_XRE/HTH_XRE/HTH_3/HipB82.86NC_004741
4S0302-64.1S0301StbD78.59NC_004741
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.