TADB
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130

# GENOME INFO
Genome size (bp) : 4277185
Link to NCBI Taxonomy Browser by Tax_id :267671
 
# TA INFO in replicon: NC_005823
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 LIC10866 LIC10867 - 1045304..1045955 vapBC/RHH-PIN
2 2 LIC11165 LIC11164 - 1434458..1435164 -/HEPN-MNT
3 2 LIC11193 LIC11192 - 1468396..1468951 mazEF/RHH-MazF
4 2 LIC12116 LIC12117 - 2558167..2558901 vapBC/RHH-PIN
5 2 LIC12660 LIC12659 - 3222663..3223291 vapBC/AbrB-PIN
6 2 LIC12713 LIC12712 - 3298986..3299619 vapBC/PHD-PIN
7 2 LIC13407 LIC13408 - 4178276..4179098 -/ArsR-COG3832

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1LIC10867-63.81LIC10866COG1848/COG4113/PIN/VapC72.57NC_005823
2LIC12712Phd87.03LIC12713PIN/VapC87.56NC_005823
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.