TADB
Pseudomonas syringae pv. syringae B728a chromosome, complete chromosome

# GENOME INFO
Genome size (bp) : 6093698
Link to NCBI Taxonomy Browser by Tax_id :205918
 
# TA INFO in replicon: NC_007005
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Psyr_0884 Psyr_0885 - 1007353..1008260 -/COG5642-COG5654
2 2 Psyr_0890 Psyr_0889 - 1011517..1012115 mazEF */AbrB-MazF
3 2 Psyr_0894 Psyr_0895 - 1014523..1015157 vapBC */AbrB-PIN
4 2 Psyr_2924 Psyr_2925 - 3512951..3514583 hipBA */Xre-HipA
5 2 Psyr_3418 Psyr_3417 - 4081292..4081995 vapBC */PHD-PIN
6 2 Psyr_3804 Psyr_3805 - 4522205..4525665 PsyrTA/-
7 2 Psyr_3833 Psyr_3832 - 4568993..4569518 relBE or parDE */PHD-RelE
8 2 Psyr_4644 Psyr_4645 - 5508664..5509275 relBE or parDE */PHD-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Psyr_1597-63.23Psyr_1596HTH_XRE/HTH_XRE/HTH_3/HipB73.17NC_007005
2Psyr_4645-67.1Psyr_4644Plasmid_stabil72.91NC_007005
3Psyr_3832StbD92.09Psyr_3833RelE93.12NC_007005
4Psyr_3417-62.9Psyr_3418VapC/PIN/COG184872.26NC_007005
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.