TADB
Xanthomonas campestris pv. campestris str. 8004 chromosome, chromosome

# GENOME INFO
Genome size (bp) : 5148708
Link to NCBI Taxonomy Browser by Tax_id :314565
 
# TA INFO in replicon: NC_007086
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 XC_0259 XC_0258 - 313931..314865 -/Xre-COG5654
2 2 XC_1051 XC_1052 - 1267659..1268437 -/RHH-GNAT
3 2 XC_1066 XC_1065 - 1282754..1283554 RelBE or parDE */RHH-RelE
4 2 XC_2327 XC_2328 - 2813570..2814231 vapBC */AbrB-PIN
5 2 XC_2599 XC_2600 - 3137749..3138533 vapBC */AbrB-PIN
6 2 XC_3185 XC_3186 - 3818343..3818920 RelBE or parDE */RHH-RelE
7 2 XC_3211 XC_3212 - 3856019..3856626 RelBE or parDE */RHH-RelE
8 2 XC_3521 XC_3520 - 4181328..4181947 mazEF, ccd or relBE */RHH-MazF

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1XC_2600AbrB/SpoVT_AbrB83.22XC_2599COG184885.98NC_007086
2XC_1065HTH_483.04XC_1066Plasmid_stabil/ParE89.26NC_007086
3XC_3186-67.93XC_3185Plasmid_stabil/ParE75.76NC_007086
4XC_2328AbrB/SpoVT_AbrB/MazE87.23XC_2327VapC/PIN/COG184887.89NC_007086
5XC_3212COG3609/HTH_463.87XC_3211ParE/Plasmid_stabil76.3NC_007086
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.