TADB
Methanosarcina barkeri str. Fusaro, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4837408
Link to NCBI Taxonomy Browser by Tax_id :269797
 
# TA INFO in replicon: NC_007355
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Mbar_A0223 Mbar_A0224 - 263361..263901 RelBE or parDE */RHH-RelE
2 2 Mbar_A1021 Mbar_A1020 - 1246668..1247171 RelBE or parDE */RHH-RelE
3 2 Mbar_A2121 Mbar_A2122 - 2676685..2677146 hicBA */HicB-HicA
4 2 Mbar_A2251 Mbar_A2250 - 2859144..2860374 -/RHH-GNAT
5 2 Mbar_A2354 Mbar_A2353 - 2980192..2980634 hicBA */HicB-HicA
6 2 Mbar_A2364 Mbar_A2363 - 2989916..2990358 hicBA */HicB-HicA
7 2 Mbar_A2868 Mbar_A2867 - 3672711..3673879 vapBC */COG2886-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Mbar_A2363COG159883.81Mbar_A2364COG172484.32NC_007355
2Mbar_A2488-61.71Mbar_A2487RelE78.87NC_007355
3Mbar_A2122COG159883.81Mbar_A2121COG172486.22NC_007355
4Mbar_A0224-62.64Mbar_A0223RelE80.02NC_007355
5Mbar_A2368COG159882Mbar_A2369COG159886.22NC_007355
6Mbar_A1020-68.29Mbar_A1021RelE80.86NC_007355
7Mbar_A0691-63.9Mbar_A0692HTH_XRE/HTH_XRE/HTH_3/HipB/VapI73.89NC_007355
8Mbar_A0312-67.55Mbar_A0313DOC/Doc74.84NC_007355
9Mbar_A2991-62.19Mbar_A2992HTH_XRE/HTH_XRE/HTH_3/VapI/HipB77.4NC_007355
10Mbar_A3340-60.03Mbar_A3339HTH_XRE/HTH_XRE/HTH_3/HipB/VapI73.15NC_007355
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.