TADB
Shigella sonnei Ss046 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4825265
Link to NCBI Taxonomy Browser by Tax_id :300269
 
# TA INFO in replicon: NC_007384
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SSON_0267 SSON_0268 - 296108..296649 RelBE or parDE */RHH-RelE
2 2 SSON_0409 SSON_0410 - 434588..435473 -/RHH-GNAT
3 2 SSON_2087 SSON_2088 - 2181833..2182335 relBE or parDE */PHD-RelE
4 2 SSON_2862 SSON_2861 - 3003765..3004492 relBE */Xre-RelE
5 2 SSON_2939 SSON_2940 - 3080483..3081066 mazEF */AbrB-MazF
6 2 SSON_3122 SSON_3123 - 3280648..3281375 relBE */Xre-RelE
7 2 SSON_3492 SSON_3493 - 3652860..3653619 -/YhfG-Fic

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SSON_2489HTH_XRE/HTH_XRE/HTH_382.13SSON_2490HTH_XRE/HTH_XRE/HTH_3/HipB82.89NC_007384
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.