Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. chromosome
# GENOME INFO
Genome size (bp) : 2909809
Link to NCBI Taxonomy Browser by Tax_id :292415
# TA INFO in replicon: NC_007404
#	Type	Toxin	Antitoxin	Regulator	Location	Classification(family/domain)
1	2	Tbd_0673	Tbd_0672	-	713650..714453	relBE */Xre-RelE
2	2	Tbd_0894	Tbd_0895	-	944212..944912	vapBC */PHD-PIN
3	2	Tbd_1493	Tbd_1494	-	1584330..1585573	-/COG5642-COG5654
4	2	Tbd_1961	Tbd_1962	-	2054820..2055400	RelBE or parDE */RHH-RelE
5	2	Tbd_1974	Tbd_1973	-	2064056..2064522	hicBA */HicB-HicA
6	2	Tbd_2277	Tbd_2278	-	2350882..2351815	relBE or parDE */PHD-RelE
7	2	Tbd_2422	Tbd_2423	-	2493248..2493879	vapBC */PHD-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .

#	Toxin	Domain1	Score1	Antitoxin	Domain2	Score2	Replicon
1	Tbd_0672	VapI/HTH_XRE/HTH_XRE/HTH_3	86.1	Tbd_0673	HigB/Plasmid_killer	86.11	NC_007404
2	Tbd_2620	-	63.55	Tbd_2619	HTH_4	73.1	NC_007404
3	Tbd_2619	HTH_4	73.1	Tbd_2618	-	61.84	NC_007404
4	Tbd_1348	-	63.61	Tbd_1347	HTH_XRE/HTH_3/HTH_XRE/HipB	70.39	NC_007404
5	Tbd_1962	-	68.26	Tbd_1961	Plasmid_stabil/ParE	76.35	NC_007404
6	Tbd_1973	COG1598	84.03	Tbd_1974	COG1724	87.97	NC_007404

Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.