TADB
Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 2909809
Link to NCBI Taxonomy Browser by Tax_id :292415
 
# TA INFO in replicon: NC_007404
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Tbd_0673 Tbd_0672 - 713650..714453 relBE */Xre-RelE
2 2 Tbd_0894 Tbd_0895 - 944212..944912 vapBC */PHD-PIN
3 2 Tbd_1493 Tbd_1494 - 1584330..1585573 -/COG5642-COG5654
4 2 Tbd_1961 Tbd_1962 - 2054820..2055400 RelBE or parDE */RHH-RelE
5 2 Tbd_1974 Tbd_1973 - 2064056..2064522 hicBA */HicB-HicA
6 2 Tbd_2277 Tbd_2278 - 2350882..2351815 relBE or parDE */PHD-RelE
7 2 Tbd_2422 Tbd_2423 - 2493248..2493879 vapBC */PHD-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Tbd_0672VapI/HTH_XRE/HTH_XRE/HTH_386.1Tbd_0673HigB/Plasmid_killer86.11NC_007404
2Tbd_2620-63.55Tbd_2619HTH_473.1NC_007404
3Tbd_2619HTH_473.1Tbd_2618-61.84NC_007404
4Tbd_1348-63.61Tbd_1347HTH_XRE/HTH_3/HTH_XRE/HipB70.39NC_007404
5Tbd_1962-68.26Tbd_1961Plasmid_stabil/ParE76.35NC_007404
6Tbd_1973COG159884.03Tbd_1974COG172487.97NC_007404
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.