TADB
Nitrobacter winogradskyi Nb-255 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3402093
Link to NCBI Taxonomy Browser by Tax_id :323098
 
# TA INFO in replicon: NC_007406
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Nwi_0732 Nwi_0731 - 817732..818417 higBA (relBE) */COG5606-RelE
2 2 Nwi_0825 Nwi_0826 - 908504..909540 -/Xre-COG2856
3 2 Nwi_0836 Nwi_0837 - 917155..917924 -/RHH-GNAT
4 2 Nwi_0857 Nwi_0856 - 931448..932121 vapBC */PHD-PIN
5 2 Nwi_1262 Nwi_1263 - 1392556..1393721 -/Xre-COG2856
6 2 Nwi_2079 Nwi_2078 - 2278420..2280032 hipBA */Xre-HipA
7 2 Nwi_2483 Nwi_2484 - 2705897..2706440 -/RHH-COG2929
8 2 Nwi_2856 Nwi_2855 - 3088669..3089493 -/RHH-GNAT
9 2 Nwi_2868 Nwi_2869 - 3101193..3102816 hipBA */Xre-HipA
10 2 Nwi_3084 Nwi_3083 - 3349775..3350426 vapBC */AbrB-PIN
11 2 Nwi_3092 Nwi_3093 - 3355504..3356051 RelBE or parDE */RHH-RelE
12 2 Nwi_3110 Nwi_3111 - 3369450..3370135 relBE */Xre-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Nwi_3083AbrB/SpoVT_AbrB62.16Nwi_3084COG184882.35NC_007406
2Nwi_3093COG360989.18Nwi_3092ParE/Plasmid_stabil91.57NC_007406
3Nwi_2078HTH_XRE/HTH_XRE/HipB/HTH_363.26Nwi_2079HipA84.19NC_007406
4Nwi_1264-60.58Nwi_1263HTH_XRE/HTH_XRE/HTH_3/HipB/VapI73NC_007406
5Nwi_0823-60.68Nwi_0824HTH_XRE/HTH_XRE/HipB71.81NC_007406
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.