TADB
Pseudomonas fluorescens Pf0-1 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 6438405
Link to NCBI Taxonomy Browser by Tax_id :205922
 
# TA INFO in replicon: NC_007492
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Pfl01_0205 Pfl01_0204 - 242972..244436 hipBA */Xre-HipA
2 2 Pfl01_0270 Pfl01_0269 - 316192..316796 relBE */Xre-RelE
3 2 Pfl01_0304 Pfl01_0305 - 351918..352568 hicBA */HicB-HicA
4 2 Pfl01_0419 Pfl01_0420 - 480394..480983 relBE */Xre-RelE
5 2 Pfl01_3062 Pfl01_3061 - 3503435..3504084 RelBE or parDE */RHH-RelE
6 2 Pfl01_3122 Pfl01_3123 - 3583716..3584707 -/COG5642-COG5654
7 2 Pfl01_3170 Pfl01_3169 - 3638252..3638720 RelBE or parDE */RHH-RelE
8 2 Pfl01_4635 Pfl01_4634 - 5234185..5234759 relBE or parDE */PHD-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Pfl01_3169-61.1Pfl01_3170Plasmid_stabil/ParE79.32NC_007492
2Pfl01_1674-64Pfl01_1673HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.27NC_007492
3Pfl01_2008-63.9Pfl01_2007HTH_XRE/HTH_3/HTH_XRE75.25NC_007492
4Pfl01_1332COG159860.16Pfl01_1331COG549984.52NC_007492
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.