TADB
Carboxydothermus hydrogenoformans Z-2901 chromosome, complete chromosome

# GENOME INFO
Genome size (bp) : 2401520
Link to NCBI Taxonomy Browser by Tax_id :246194
 
# TA INFO in replicon: NC_007503
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 CHY_0069 CHY_0070 - 60721..61600 -/HEPN-MNT
2 2 CHY_0266 CHY_0265 - 232334..232947 phd-doc */AbrB-Fic
3 2 CHY_0716 CHY_0715 - 633211..633815 mazEF, ccd or relBE */RHH-MazF
4 2 CHY_1111 CHY_1110 - 986546..987237 -/HEPN-MNT
5 2 CHY_1722 CHY_1721 - 1535886..1536525 vapBC */PHD-PIN
6 2 CHY_1914 CHY_1915 - 1714982..1715559 vapBC */AbrB-PIN
7 2 CHY_2482 CHY_2483 - 2222478..2223367 -/HEPN-MNT
8 2 CHY_2495 CHY_2494 - 2237159..2237654 -/HEPN-MNT
9 2 CHY_2496 CHY_2497 - 2237984..2238640 hicBA */HicB-HicA
10 2 CHY_2536 CHY_2535 - 2264611..2265226 -/HEPN-MNT
11 2 CHY_2539 CHY_2540 - 2265528..2266213 vapBC */PHD-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1CHY_1695-62CHY_1696HTH_XRE/HTH_XRE/HTH_3/HipB/VapI75.22NC_007503
2CHY_2531-67.68CHY_2532VapC/PIN/COG184874.31NC_007503
3CHY_1693-62.68CHY_1694HTH_XRE/HTH_XRE/HTH_3/HipB72.42NC_007503
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.