TADB
Chlorobium chlorochromatii CaD3 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 2572079
Link to NCBI Taxonomy Browser by Tax_id :340177
 
# TA INFO in replicon: NC_007514
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Cag_0015 Cag_0016 - 16701..17355 -/HEPN-MNT
2 2 Cag_0085 Cag_0084 - 94409..95057 relBE */Xre-RelE
3 2 Cag_0101 Cag_0102 - 115674..117326 hipBA */Xre-HipA
4 2 Cag_0151 Cag_0152 - 169072..169835 -/HEPN-MNT
5 2 Cag_0237 Cag_0236 - 267525..268283 relBE */Xre-RelE
6 2 Cag_0266 Cag_0267 - 298405..299063 vapBC */RHH-PIN
7 2 Cag_0280 Cag_0279 - 306808..307400 vapBC */Xre-PIN
8 2 Cag_0294 Cag_0295 - 323822..325520 -/Xre-Fic
9 2 Cag_0310 Cag_0312 - 345544..348609 vapBC */COG2886-PIN
10 2 Cag_0429 Cag_0428 - 501983..502562 mazEF */AbrB-MazF
11 2 Cag_0520 Cag_0521 - 607200..607782 -/RHH-COG2929
12 2 Cag_0575 Cag_0576 - 680653..681297 RelBE or parDE */RHH-RelE
13 2 Cag_0585 Cag_0584 - 688130..688686 RelBE or parDE */RHH-RelE
14 2 Cag_0594 Cag_0593 - 697153..697868 -/HEPN-MNT
15 2 Cag_0679 Cag_0678 - 950877..951521 vapBC */AbrB-PIN
16 2 Cag_0681 Cag_0680 - 951915..952644 vapBC */Xre-PIN
17 2 Cag_0685 Cag_0684 - 955586..956076 RelBE or parDE */RHH-RelE
18 2 Cag_0697 Cag_0696 - 969321..970103 vapBC */RHH-PIN
19 2 Cag_0829 Cag_0830 - 1156774..1157312 mazEF */XF1863-MazF
20 2 Cag_0857 Cag_0858 - 1189209..1189632 vapBC */Xre-PIN
21 2 Cag_0909 Cag_0908 - 1242588..1243147 relBE or parDE */PHD-RelE
22 2 Cag_0913 Cag_0914 - 1246954..1247625 relBE */Xre-RelE
23 2 Cag_0957 Cag_0956 - 1295446..1296053 relBE or parDE */PHD-RelE
24 2 Cag_1077 Cag_1078 - 1459223..1459869 vapBC */AbrB-PIN
25 2 Cag_1103 Cag_1104 - 1491093..1491594 -/RHH-COG2929
26 2 Cag_1130 Cag_1129 - 1524509..1525009 RelBE or parDE */RHH-RelE
27 2 Cag_1259 Cag_1260 - 1726497..1727466 relBE */Xre-RelE
28 2 Cag_1273 Cag_1272 - 1736883..1737636 -/RHH-GNAT
29 2 Cag_1275 Cag_1274 - 1737738..1739268 hipBA */Xre-HipA
30 2 Cag_1307 Cag_1308 - 1774268..1774976 RelBE or parDE */RHH-RelE
31 2 Cag_1322 Cag_1323 - 1789662..1790200 RelBE or parDE */RHH-RelE
32 2 Cag_1325 Cag_1324 - 1791517..1792152 vapBC */AbrB-PIN
33 2 Cag_1360 Cag_1361 - 1826517..1827078 -/RHH-COG2929
34 2 Cag_1385 Cag_1386 - 1850748..1851240 relBE */Xre-RelE
35 2 Cag_1433 Cag_1432 - 1901863..1902484 vapBC */AbrB-PIN
36 2 Cag_1488 Cag_1487 - 1958779..1959373 relBE */Xre-RelE
37 2 Cag_1577 Cag_1576 - 2060642..2061150 RelBE or parDE */RHH-RelE
38 2 Cag_1618 Cag_1619 - 2116979..2117654 relBE */Xre-RelE
39 2 Cag_1752 Cag_1751 - 2269191..2269936 relBE or parDE */PHD-RelE
40 2 Cag_1799 Cag_1798 - 2319848..2320741 relBE */Xre-RelE
41 2 Cag_1812 Cag_1811 - 2332987..2333614 relBE */Xre-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Cag_1994-67.97Cag_1995Plasmid_stabil71.3NC_007514
2Cag_0678-62.97Cag_0679PIN/COG184871.42NC_007514
3Cag_1389VapC/PIN/COG184874.28Cag_1390-64.32NC_007514
4Cag_1577RelE79.28Cag_1578-67.97NC_007514
5Cag_0659-68.39Cag_0660PIN/COG1848/COG4113/VapC74.57NC_007514
6Cag_0279-67.97Cag_0280PIN/VapC73.83NC_007514
7Cag_0680-62.64Cag_0681VapC/PIN/COG184873.93NC_007514
8Cag_0830-62.81Cag_0829MazF/PemK74.84NC_007514
9Cag_1388-67.68Cag_1389VapC/PIN/COG184874.28NC_007514
10Cag_1505-66.22Cag_1506RelE73.35NC_007514
11Cag_0267HicB/HicB85.77Cag_0268-62NC_007514
12Cag_1318-65.71Cag_1319MazF/PemK74.51NC_007514
13Cag_0698-63.1Cag_0697PIN70.42NC_007514
14Cag_0655-66.22Cag_0656VapC/PIN74.34NC_007514
15Cag_1487VapI/HTH_XRE/HTH_XRE/HTH_390.42Cag_1488HigB/Plasmid_killer/RelE94.06NC_007514
16Cag_1495-64.1Cag_1494COG172485.26NC_007514
17Cag_1129-62Cag_1130Plasmid_stabil76.74NC_007514
18Cag_0684-61.71Cag_0685RelE76.85NC_007514
19Cag_1194VapI/HTH_XRE/HTH_XRE/HTH_3/HipB64.81Cag_1195Plasmid_killer/HigB73.86NC_007514
20Cag_0819-68.29Cag_0818PIN/VapC73.89NC_007514
21Cag_0272-62.45Cag_0273ParE/Plasmid_stabil76.72NC_007514
22Cag_0660PIN/COG1848/COG4113/VapC74.57Cag_0661-61.74NC_007514
23Cag_0280PIN/VapC73.83Cag_0281-62.42NC_007514
24Cag_0574-65.77Cag_0575ParE/Plasmid_stabil76.09NC_007514
25Cag_0584-65.71Cag_0585Plasmid_stabil/ParE78.81NC_007514
26Cag_0273ParE/Plasmid_stabil76.72Cag_0274-65.77NC_007514
27Cag_1291-64.03Cag_1292PIN73.18NC_007514
28Cag_0267HicB/HicB85.77Cag_0266PIN/VapC85.91NC_007514
29Cag_1797-60.03Cag_1798HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.75NC_007514
30Cag_1576-65.58Cag_1577RelE79.28NC_007514
31Cag_0706-65.58Cag_0707ParE/Plasmid_stabil77.6NC_007514
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.