TADB
Geobacter metallireducens GS-15 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3997420
Link to NCBI Taxonomy Browser by Tax_id :269799
 
# TA INFO in replicon: NC_007517
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Gmet_0216 Gmet_0217 - 248789..249491 -/HEPN-MNT
2 2 Gmet_0221 Gmet_0220 - 252558..253105 relBE or parDE */PHD-RelE
3 2 Gmet_0316 Gmet_0315 - 353732..354594 relBE */Xre-RelE
4 2 Gmet_0316 Gmet_0317 - 354256..354892 relBE */Xre-RelE
5 2 Gmet_0424 Gmet_0425 - 471097..471769 -/HEPN-MNT
6 2 Gmet_0479 Gmet_0480 - 524682..525336 -/HEPN-MNT
7 2 Gmet_0677 Gmet_0678 - 744131..744746 relBE or parDE */PHD-RelE
8 2 Gmet_1313 Gmet_1314 - 1475099..1475918 -/HEPN-MNT
9 2 Gmet_1316 Gmet_1317 - 1477315..1478177 -/HEPN-MNT
10 2 Gmet_1322 Gmet_1321 - 1479367..1479829 hicBA */HicB-HicA
11 2 Gmet_1340 Gmet_1339 - 1498144..1498799 vapBC */AbrB-PIN
12 2 Gmet_1661 Gmet_1660 - 1863465..1864558 -/COG5642-COG5654
13 2 Gmet_2503 Gmet_2502 - 2843788..2844359 mazEF */AbrB-MazF
14 2 Gmet_2592 Gmet_2591 - 2941871..2942475 hicBA */HicB-HicA
15 2 Gmet_2973 Gmet_2972 - 3359680..3360278 relBE */Xre-RelE
16 2 Gmet_3076 Gmet_3077 - 3474292..3474977 vapBC */PHD-PIN
17 2 Gmet_3257 Gmet_3258 - 3666618..3667428 -/HEPN-MNT

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Gmet_1321COG159884.1Gmet_1322COG172487.68NC_007517
2Gmet_1322COG172487.68Gmet_1323-64.32NC_007517
3Gmet_2972VapI/HTH_XRE/HTH_3/HTH_XRE91.35Gmet_2973HigB/Plasmid_killer94.21NC_007517
4Gmet_0316-62.42Gmet_0317HTH_3/HTH_XRE/HTH_XRE/HipB72.17NC_007517
5Gmet_2602-65.77Gmet_2603MazF74.81NC_007517
6Gmet_0220StbD91.84Gmet_0221RelE92.34NC_007517
7Gmet_1321COG159884.1Gmet_1320-63.93NC_007517
8Gmet_2533-65.35Gmet_2534HTH_XRE/HTH_XRE/HTH_377.19NC_007517
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.