TADB
Xanthomonas oryzae pv. oryzae MAFF 311018 chromosome, complete chromosome

# GENOME INFO
Genome size (bp) : 4940217
Link to NCBI Taxonomy Browser by Tax_id :342109
 
# TA INFO in replicon: NC_007705
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 XOO_0142 XOO_0143 - 144457..145112 relBE or parDE */PHD-RelE
2 2 XOO_0821 XOO_0820 - 890883..891340 RelBE or parDE */RHH-RelE
3 2 XOO_2718 XOO_2719 - 3066146..3066801 vapBC */AbrB-PIN
4 2 XOO_3244 XOO_3243 - 3685701..3686357 phd-doc */AbrB-Fic
5 2 XOO_3260 XOO_3261 - 3702759..3703899 -/HEPN-MNT
6 2 XOO_3264 XOO_3265 - 3706787..3707365 RelBE or parDE */RHH-RelE
7 2 XOO_3270 XOO_3271 - 3715256..3715834 RelBE or parDE */RHH-RelE
8 2 XOO_4211 XOO_4210 - 4752692..4753281 relBE */Xre-RelE
9 2 XOO_4246 XOO_4245 - 4800329..4802223 hipBA */Xre-HipA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1XOO_3271-60.03XOO_3270Plasmid_stabil/ParE75.48NC_007705
2XOO_4210VapI/HTH_3/HTH_XRE/HTH_XRE/HipB88.48XOO_4211HigB/Plasmid_killer94.38NC_007705
3XOO_2719AbrB/SpoVT_AbrB/MazE85.99XOO_2718VapC/PIN/COG184887.48NC_007705
4XOO_4245HTH_XRE/HTH_XRE/HTH_3/HipB/VapI63.38XOO_4246HipA85.88NC_007705
5XOO_3265-61.84XOO_3264ParE/Plasmid_stabil75.57NC_007705
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.