TADB
Jannaschia sp. CCS1 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4317977
Link to NCBI Taxonomy Browser by Tax_id :290400
 
# TA INFO in replicon: NC_007802
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Jann_0024 Jann_0025 - 23724..24262 RelBE or parDE */RHH-RelE
2 2 Jann_0561 Jann_0562 - 548053..548839 -/ArsR-COG3832
3 2 Jann_0938 Jann_0939 - 894920..895695 -/ArsR-COG3832
4 2 Jann_1434 Jann_1433 - 1402209..1402837 vapBC */PHD-PIN
5 2 Jann_2413 Jann_2412 - 2412869..2413773 -/ArsR-COG3832
6 2 Jann_3010 Jann_3009 - 3028901..3029532 vapBC */AbrB-PIN
7 2 Jann_3408 Jann_3407 - 3457348..3458090 -/ArsR-COG3832
8 2 Jann_3453 Jann_3452 - 3500915..3501582 phd-doc */AbrB-Fic

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Jann_3009AbrB/SpoVT_AbrB85.76Jann_3010COG1848/PIN/VapC87.4NC_007802
2Jann_2652-68.35Jann_2653HTH_XRE/HTH_3/HTH_XRE/HipB75.56NC_007802
3Jann_0025COG360987.76Jann_0026-60.77NC_007802
4Jann_0025COG360987.76Jann_0024ParE/Plasmid_stabil92.53NC_007802
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.