TADB
Rhodoferax ferrireducens T118 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4712337
Link to NCBI Taxonomy Browser by Tax_id :338969
 
# TA INFO in replicon: NC_007908
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Rfer_0179 Rfer_0180 - 178617..179242 hicBA */HicB-HicA
2 2 Rfer_0624 Rfer_0623 - 647471..648182 vapBC */PHD-PIN
3 2 Rfer_1750 Rfer_1749 - 1885464..1886103 RelBE or parDE */RHH-RelE
4 2 Rfer_2812 Rfer_2813 - 3113149..3114202 -/COG5642-COG5654
5 2 Rfer_2987 Rfer_2988 - 3293275..3293840 mazEF, ccd or relBE */RHH-MazF
6 2 Rfer_3404 Rfer_3405 - 3789501..3790120 phd-doc */AbrB-Fic

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Rfer_1749RelB86.18Rfer_1750RelE89.5NC_007908
2Rfer_0623StbD85.42Rfer_0624VapC/PIN/COG184886.91NC_007908
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.