TADB
Saccharophagus degradans 2-40, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5057531
Link to NCBI Taxonomy Browser by Tax_id :203122
 
# TA INFO in replicon: NC_007912
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Sde_0092 Sde_0093 - 112839..114499 hipBA */Xre-HipA
2 2 Sde_1839 Sde_1838 - 2332599..2333355 -/ArsR-COG3832
3 2 Sde_1844 Sde_1845 - 2335717..2336225 relBE or parDE */PHD-RelE
4 2 Sde_2039 Sde_2040 - 2566486..2568008 hipBA */Xre-HipA
5 2 Sde_2750 Sde_2751 - 3481448..3482049 relBE or parDE */PHD-RelE
6 2 Sde_2786 Sde_2787 - 3518557..3519336 relBE */Xre-RelE
7 2 Sde_3816 Sde_3817 - 4819058..4819830 -/Xre-GNAT
8 2 Sde_3989 Sde_3990 - 5022604..5023166 mazEF, ccd or relBE */RHH-MazF

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Sde_3818-60.29Sde_3817HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.66NC_007912
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.