TADB
Lactobacillus salivarius UCC118 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 1827111
Link to NCBI Taxonomy Browser by Tax_id :362948
 
# TA INFO in replicon: NC_007929
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 LSL_0251 LSL_0250 - 296879..297837 -/Xre-Bro
2 2 LSL_0360 LSL_0359 - 392559..393191 mazEF, ccd or relBE */RHH-MazF
3 2 LSL_0741 LSL_0742 - 784990..785821 -/Xre-COG2856
4 2 LSL_1190 LSL_1191 - 1229718..1230594 -/Xre-COG2856
5 2 LSL_1388 LSL_1389 - 1461649..1462274 phd-doc */PHD-Fic

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1LSL_1192HTH_XRE84.21LSL_1193HTH_XRE/HTH_XRE/HTH_3/HipB86.99NC_007929
2LSL_0248-62LSL_0247HTH_XRE/HTH_XRE/HTH_379.21NC_007929
3LSL_0359-68.29LSL_0360PemK/MazF75.47NC_007929
4LSL_1389-67.68LSL_1388Doc/DOC74.9NC_007929
5LSL_1193HTH_XRE/HTH_XRE/HTH_3/HipB86.99LSL_1194-62.97NC_007929
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.