TADB
Rickettsia bellii RML369-C chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 1522076
Link to NCBI Taxonomy Browser by Tax_id :336407
 
# TA INFO in replicon: NC_007940
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 RBE_0137 RBE_0138 - 156865..157547 vapBC */AbrB-PIN
2 2 RBE_0493 RBE_0494 - 555442..556019 vapBC */AbrB-PIN
3 2 RBE_0524 RBE_0525 - 586706..587219 relBE or parDE */PHD-RelE
4 2 RBE_0529 RBE_0528 - 588837..589479 vapBC */AbrB-PIN
5 2 RBE_0646 RBE_0645 - 715100..715698 relBE */Xre-RelE
6 2 RBE_0668 RBE_0669 - 747869..748361 -/RHH-COG2929
7 2 RBE_0720 RBE_0719 - 799458..800170 relBE */Xre-RelE
8 2 RBE_0757 RBE_0758 - 834973..835549 mazEF, ccd or relBE */RHH-MazF
9 2 RBE_0928 RBE_0927 - 1025391..1026009 vapBC */AbrB-PIN
10 2 RBE_0981 RBE_0980 - 1074945..1075599 vapBC */PHD-PIN
11 2 RBE_1021 RBE_1020 - 1119876..1120558 vapBC */PHD-PIN
12 2 RBE_1080 RBE_1079 - 1169047..1169574 relBE */Xre-RelE
13 2 RBE_1083 RBE_1082 - 1170164..1170742 mazEF, ccd or relBE */RHH-MazF
14 2 RBE_1165 RBE_1166 - 1260761..1261304 RelBE or parDE */RHH-RelE
15 2 RBE_1175 RBE_1176 - 1269214..1269922 -/HEPN-MNT
16 2 RBE_1191 RBE_1192 - 1282053..1282556 relBE or parDE */PHD-RelE
17 2 RBE_1214 RBE_1213 - 1307863..1308373 vapBC */AbrB-PIN
18 2 RBE_1229 RBE_1230 - 1321693..1322323 vapBC */AbrB-PIN
19 2 RBE_1244 RBE_1245 - 1334872..1335530 vapBC */PHD-PIN
20 2 RBE_1361 RBE_1362 - 1456651..1457234 vapBC */PHD-PIN
21 2 RBE_1375 RBE_1376 - 1476286..1476905 relBE */Xre-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1RBE_1192-64.87RBE_1191RelE80.72NC_007940
2RBE_0927SpoVT_AbrB/AbrB/MazE86.42RBE_0928COG411386.43NC_007940
3RBE_1373-66.68RBE_1374MazF/PemK75.93NC_007940
4RBE_1166COG360986.04RBE_1165ParE/Plasmid_stabil88.14NC_007940
5RBE_1376HTH_XRE/HTH_XRE/HTH_3/HipB/COG5499/VapI86.59RBE_1375RelE93.01NC_007940
6RBE_1082-67.55RBE_1083MazF76.24NC_007940
7RBE_1166COG360986.04RBE_1167-62.77NC_007940
8RBE_0138AbrB/SpoVT_AbrB85.95RBE_0137PIN/COG411386.33NC_007940
9RBE_0494AbrB/SpoVT_AbrB85.59RBE_0493VapC87.46NC_007940
10RBE_1402-61.64RBE_1403HTH_XRE70.71NC_007940
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.