TADB
Polaromonas sp. JS666 plasmid 2, complete sequence. plasmid 2

# GENOME INFO
Genome size (bp) : 338007
Link to NCBI Taxonomy Browser by Tax_id :296591
 
# TA INFO in replicon: NC_007950
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Bpro_5352 Bpro_5351 - 117892..118571 -/HEPN-MNT
2 2 Bpro_5381 Bpro_5380 - 139365..139963 relBE */Xre-RelE
3 2 Bpro_5419 Bpro_5420 - 170837..172461 hipBA */Xre-HipA
4 2 Bpro_5486 Bpro_5485 - 235579..236252 relBE */Xre-RelE
5 2 Bpro_5528 Bpro_5527 - 279402..280348 -/Xre-COG5654
6 2 Bpro_5546 Bpro_5547 - 305534..306240 ygiT-mqsR (relBE) */Xre-YgiU

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Bpro_5380VapI/HTH_XRE/HTH_XRE/HTH_3/COG549991.47Bpro_5381Plasmid_killer/HigB93.68NC_007950
2Bpro_5380VapI/HTH_XRE/HTH_XRE/HTH_3/COG549991.47Bpro_5379-63.58NC_007950
3Bpro_5485COG549974.48Bpro_5486-64.23NC_007950
4Bpro_5484-60.13Bpro_5485COG549974.48NC_007950
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.