TADB
Pseudomonas entomophila L48 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5888780
Link to NCBI Taxonomy Browser by Tax_id :384676
 
# TA INFO in replicon: NC_008027
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 PSEEN0366 PSEEN0367 - 379825..380479 relBE */Xre-RelE
2 2 PSEEN1045 PSEEN1046 - 1096793..1097333 relBE */Xre-RelE
3 2 PSEEN1328 PSEEN1327 - 1390934..1392527 hipBA */Xre-HipA
4 2 PSEEN1330 PSEEN1331 - 1393621..1395110 hipBA */Xre-HipA
5 2 PSEEN1945 PSEEN1946 - 2033218..2033798 relBE */Xre-RelE
6 2 PSEEN2903 PSEEN2902 - 3054687..3055356 relBE */Xre-RelE
7 2 PSEEN3278 PSEEN3279 - 3538109..3538746 RelBE or parDE */RHH-RelE
8 2 PSEEN3938 PSEEN3939 - 4233170..4233770 relBE */Xre-RelE
9 2 PSEEN3950 PSEEN3949 - 4251076..4251562 -/RHH-COG2929
10 2 PSEEN4321 PSEEN4322 - 4610676..4611280 relBE */Xre-RelE
11 2 PSEEN4876 PSEEN4875 - 5184967..5185607 vapBC */AbrB-PIN
12 2 PSEEN5230 PSEEN5229 - 5547015..5547631 hicBA */HicB-HicA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1PSEEN1946VapI/HTH_XRE/HTH_XRE/HTH_3/COG549990.96PSEEN1945Plasmid_killer/HigB93.04NC_008027
2PSEEN1429-63.55PSEEN1428HTH_XRE/HTH_XRE/HTH_3/HipB74.33NC_008027
3PSEEN4876VapC/PIN/COG184889.05PSEEN4877-60.32NC_008027
4PSEEN5217-62.9PSEEN5216HTH_XRE/HTH_XRE/HTH_372.8NC_008027
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.