TADB
Ruegeria sp. TM1040 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3200938
Link to NCBI Taxonomy Browser by Tax_id :292414
 
# TA INFO in replicon: NC_008044
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 TM1040_0816 TM1040_0815 - 858001..858688 relBE */Xre-RelE
2 2 TM1040_1683 TM1040_1684 - 1779945..1780608 hicBA */HicB-HicA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1TM1040_1732-68.26TM1040_1733HTH_XRE/HTH_XRE/HTH_3/HipB75.31NC_008044
2TM1040_1908-65.68TM1040_1909HTH_XRE/HTH_XRE/HipB/HTH_371.29NC_008044
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.