TADB
Shigella flexneri 5 str. 8401 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4574284
Link to NCBI Taxonomy Browser by Tax_id :373384
 
# TA INFO in replicon: NC_008258
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SFV_0397 SFV_0398 - 417089..417981 -/RHH-GNAT
2 2 SFV_3124 SFV_3123 - 3195820..3196547 relBE */Xre-RelE
3 2 SFV_3367 SFV_3368 - 3421993..3422752 -/YhfG-Fic

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SFV_0297-64.1SFV_0298StbD78.59NC_008258
2SFV_2453HTH_XRE/HTH_XRE/HTH_382.13SFV_2454HTH_XRE/HTH_XRE/HTH_3/HipB82.76NC_008258
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.