TADB
Syntrophomonas wolfei subsp. wolfei str. Goettingen chromosome, chromosome

# GENOME INFO
Genome size (bp) : 2936195
Link to NCBI Taxonomy Browser by Tax_id :335541
 
# TA INFO in replicon: NC_008346
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Swol_0119 Swol_0118 - 125691..126234 relBE */AbrB-RelE
2 2 Swol_0151 Swol_0150 - 174687..175320 RelBE or parDE */RHH-RelE
3 2 Swol_0217 Swol_0216 - 262062..262899 -/HEPN-MNT
4 2 Swol_0219 Swol_0218 - 262975..263447 hicBA */HicB-HicA
5 2 Swol_0221 Swol_0220 - 263588..264341 -/HEPN-MNT
6 2 Swol_0226 Swol_0225 - 267238..267902 vapBC */AbrB-PIN
7 2 Swol_0286 Swol_0287 - 329577..330241 relBE */AbrB-RelE
8 2 Swol_0392 Swol_0393 - 468879..469423 RelBE or parDE */RHH-RelE
9 2 Swol_0432 Swol_0433 - 512815..513316 relBE or parDE */PHD-RelE
10 2 Swol_0496 Swol_0495 - 583694..584258 relBE or parDE */PHD-RelE
11 2 Swol_0499 Swol_0500 - 588218..588836 -/HEPN-MNT
12 2 Swol_0548 Swol_0549 - 645213..645829 -/HEPN-MNT
13 2 Swol_0573 Swol_0572 - 663168..663981 hicBA */HicB-HicA
14 2 Swol_0577 Swol_0576 - 666505..667078 relBE or parDE */PHD-RelE
15 2 Swol_0603 Swol_0604 - 698793..699480 -/HEPN-MNT
16 2 Swol_0621 Swol_0620 - 713062..713507 hicBA */HicB-HicA
17 2 Swol_0794 Swol_0795 - 905174..905628 hicBA */HicB-HicA
18 2 Swol_1010 Swol_1009 - 1146918..1147373 hicBA */HicB-HicA
19 2 Swol_1075 Swol_1074 - 1222932..1223466 RelBE or parDE */RHH-RelE
20 2 Swol_1102 Swol_1103 - 1269392..1270043 -/HEPN-MNT
21 2 Swol_1182 Swol_1183 - 1369858..1370348 RelBE or parDE */RHH-RelE
22 2 Swol_1298 Swol_1297 - 1497263..1497846 -/HEPN-MNT
23 2 Swol_1411 Swol_1410 - 1624099..1624687 relBE or parDE */PHD-RelE
24 2 Swol_1543 Swol_1542 - 1760885..1762728 -/PHD-RelE-
25 2 Swol_1570 Swol_1571 - 1790470..1791100 vapBC */RHH-PIN
26 2 Swol_1661 Swol_1660 - 1888472..1889101 hicBA */HicB-HicA
27 2 Swol_1728 Swol_1729 - 1970542..1971163 -/HEPN-MNT
28 2 Swol_1876 Swol_1877 - 2139775..2140345 mazEF */AbrB-MazF
29 2 Swol_1879 Swol_1880 - 2141542..2142167 mazEF, ccd or relBE */RHH-MazF
30 2 Swol_1971 Swol_1972 - 2250361..2250947 relBE or parDE */PHD-RelE
31 2 Swol_1975 Swol_1976 - 2253424..2254081 vapBC */AbrB-PIN
32 2 Swol_2003 Swol_2004 - 2289907..2291134 -/Xre-COG2856
33 2 Swol_2275 Swol_2276 - 2624989..2625607 phd-doc */AbrB-Fic
34 2 Swol_2474 Swol_2475 - 2806807..2807485 vapBC */AbrB-PIN
35 2 Swol_2504 Swol_2505 - 2852722..2853307 -/COG2442-PIN

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Swol_2276-68.26Swol_2275Doc/DOC76.36NC_008346
2Swol_2248HTH_XRE/HTH_XRE/HTH_3/HipB63.64Swol_2247COG1848/PIN82.53NC_008346
3Swol_0483VapI/HTH_XRE/HTH_XRE/HTH_3/HipB/COG549964.04Swol_0482HigB/Plasmid_killer79.06NC_008346
4Swol_0218COG159883.81Swol_0219COG172487.71NC_008346
5Swol_0218COG159883.81Swol_0217-60.58NC_008346
6Swol_1880-65.35Swol_1879PemK/MazF76.07NC_008346
7Swol_1410-68.39Swol_1411ParE/Plasmid_stabil74.93NC_008346
8Swol_0118SpoVT_AbrB84.61Swol_0119RelE92.42NC_008346
9Swol_1972-63.03Swol_1971ParE/Plasmid_stabil76.12NC_008346
10Swol_0433StbD92.85Swol_0434-62.77NC_008346
11Swol_1571-64.19Swol_1570COG1848/PIN/VapC72.55NC_008346
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.