TADB
Lactobacillus gasseri ATCC 33323 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 1894360
Link to NCBI Taxonomy Browser by Tax_id :324831
 
# TA INFO in replicon: NC_008530
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 LGAS_0236 LGAS_0235 - 271013..271688 phd-doc */AbrB-Fic
2 2 LGAS_0394 LGAS_0393 - 409214..409866 RelBE or parDE */RHH-RelE
3 2 LGAS_0574 LGAS_0575 - 602783..603587 -/Xre-COG2856
4 2 LGAS_0585 LGAS_0584 - 607872..608955 -/Xre-Bro
5 2 LGAS_0636 LGAS_0637 - 642869..643673 -/Xre-COG2856
6 2 LGAS_0647 LGAS_0646 - 647958..649041 -/Xre-Bro
7 2 LGAS_0928 LGAS_0929 - 925063..925632 relBE */AbrB-RelE
8 2 LGAS_1048 LGAS_1047 - 1054662..1055251 RelBE or parDE */RHH-RelE
9 2 LGAS_1707 LGAS_1708 - 1689342..1689921 mazEF */AbrB-MazF

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1LGAS_0235VagC86.41LGAS_0236Doc/DOC88.99NC_008530
2LGAS_0577-63.1LGAS_0576HTH_XRE/HTH_XRE/HTH_3/HipB/VapI78.68NC_008530
3LGAS_0639-63.1LGAS_0638HTH_XRE/HTH_XRE/HTH_3/HipB/VapI78.68NC_008530
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.