TADB
Streptococcus pneumoniae D39 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 2046115
Link to NCBI Taxonomy Browser by Tax_id :373153
 
# TA INFO in replicon: NC_008533
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SPD_0256 SPD_0255 - 255568..256102 RelBE or parDE */RHH-RelE
2 2 SPD_1081 SPD_1082 - 1112393..1112951 RelBE or parDE */RHH-RelE
3 2 SPD_1550 SPD_1551 - 1573981..1574499 relBE or parDE */PHD-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SPD_1082-65.71SPD_1081RelE80.45NC_008533
2SPD_1252-60.45SPD_1253HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.8NC_008533
3SPD_1946-61.74SPD_1947HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.32NC_008533
4SPD_0302-66.22SPD_0303HTH_XRE/HTH_XRE/HTH_3/VapI/HipB72.77NC_008533
5SPD_1947HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.32SPD_1948-60.52NC_008533
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.