TADB
Syntrophobacter fumaroxidans MPOB chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4990251
Link to NCBI Taxonomy Browser by Tax_id :335543
 
# TA INFO in replicon: NC_008554
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Sfum_0436 Sfum_0435 - 527757..528466 hicBA */HicB-HicA
2 2 Sfum_0894 Sfum_0895 - 1102234..1102931 vapBC */RHH-PIN
3 2 Sfum_1407 Sfum_1406 - 1748172..1748842 vapBC */PHD-PIN
4 2 Sfum_1442 Sfum_1441 - 1786911..1788360 relBE */Xre-RelE
5 2 Sfum_2575 Sfum_2576 - 3182654..3183437 vapBC */AbrB-PIN
6 2 Sfum_3429 Sfum_3428 - 4191067..4191769 relBE */Xre-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Sfum_1441VapI/HTH_XRE/HTH_XRE/HTH_3/HipB64.23Sfum_1442HigB/Plasmid_killer87.4NC_008554
2Sfum_1066-63.1Sfum_1065HTH_XRE/HTH_3/HTH_XRE/HipB/VapI70.25NC_008554
3Sfum_2576AbrB/SpoVT_AbrB84.24Sfum_2575PIN/COG1848/COG4113/VapC86.05NC_008554
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.