TADB
Magnetococcus marinus MC-1 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4719581
Link to NCBI Taxonomy Browser by Tax_id :156889
 
# TA INFO in replicon: NC_008576
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Mmc1_0694 Mmc1_0695 - 831684..832716 -/MerR-PIN
2 2 Mmc1_1075 Mmc1_1074 - 1314894..1315716 -/HEPN-MNT
3 2 Mmc1_1255 Mmc1_1256 - 1549348..1549901 mazEF, ccd or relBE */RHH-MazF
4 2 Mmc1_1314 Mmc1_1315 - 1604426..1604982 RelBE or parDE */RHH-RelE
5 2 Mmc1_1337 Mmc1_1336 - 1620798..1621431 relBE */Xre-RelE
6 2 Mmc1_2059 Mmc1_2058 - 2538689..2539245 RelBE or parDE */RHH-RelE
7 2 Mmc1_2563 Mmc1_2564 - 3271862..3272495 relBE */Xre-RelE
8 2 Mmc1_2613 Mmc1_2614 - 3312324..3313362 -/Xre-COG2856
9 2 Mmc1_2661 Mmc1_2662 - 3360822..3361860 -/Xre-COG2856
10 2 Mmc1_2734 Mmc1_2735 - 3459962..3460595 relBE */Xre-RelE
11 2 Mmc1_2757 Mmc1_2756 - 3475785..3476341 RelBE or parDE */RHH-RelE
12 2 Mmc1_2829 Mmc1_2828 - 3537258..3537814 RelBE or parDE */RHH-RelE
13 2 Mmc1_2853 Mmc1_2854 - 3558084..3559122 -/Xre-COG2856
14 2 Mmc1_2883 Mmc1_2884 - 3586131..3586783 vapBC */RHH-PIN
15 2 Mmc1_2895 Mmc1_2896 - 3593262..3593840 relBE */Xre-RelE
16 2 Mmc1_3147 Mmc1_3146 - 3920604..3921271 vapBC */AbrB-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Mmc1_2035-68.13Mmc1_2036HTH_XRE/HTH_XRE/HTH_371.15NC_008576
2Mmc1_2896VapI/HTH_XRE/HTH_XRE/HTH_392.19Mmc1_2895HigB/Plasmid_killer93.9NC_008576
3Mmc1_0214-67.68Mmc1_0215VapI71.17NC_008576
4Mmc1_2058COG360989.88Mmc1_2059ParE/Plasmid_stabil89.91NC_008576
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.