TADB
Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3133902
Link to NCBI Taxonomy Browser by Tax_id :290317
 
# TA INFO in replicon: NC_008639
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Cpha266_0072 Cpha266_0071 - 82008..83373 ygiT-mqsR (relBE) */Xre-YgiU
2 2 Cpha266_0091 Cpha266_0092 - 106689..107362 vapBC */AbrB-PIN
3 2 Cpha266_0248 Cpha266_0249 - 279052..279585 hipBA */Xre-HipA
4 2 Cpha266_0252 Cpha266_0253 - 283296..283807 RelBE or parDE */RHH-RelE
5 2 Cpha266_0286 Cpha266_0287 - 315451..315913 -/RHH-COG2929
6 2 Cpha266_0289 Cpha266_0290 - 316311..316872 -/RHH-COG2929
7 2 Cpha266_0292 Cpha266_0291 - 317163..317935 -/HEPN-MNT
8 2 Cpha266_0648 Cpha266_0647 - 741053..741785 vapBC */COG2886-PIN
9 2 Cpha266_0649 Cpha266_0650 - 742217..742838 relBE */Xre-RelE
10 2 Cpha266_0654 Cpha266_0653 - 745706..747255 -/-
11 2 Cpha266_0766 Cpha266_0767 - 871030..871853 -/HEPN-MNT
12 2 Cpha266_1212 Cpha266_1211 - 1378845..1379712 -/RHH-GNAT
13 2 Cpha266_1217 Cpha266_1216 - 1382417..1382964 RelBE or parDE */RHH-RelE
14 2 Cpha266_1226 Cpha266_1227 - 1394946..1395511 RelBE or parDE */RHH-RelE
15 2 Cpha266_1376 Cpha266_1377 - 1573727..1574195 RelBE or parDE */RHH-RelE
16 2 Cpha266_1380 Cpha266_1379 - 1574662..1575233 mazEF, ccd or relBE */RHH-MazF
17 2 Cpha266_1382 Cpha266_1381 - 1575439..1576095 vapBC */RHH-PIN
18 2 Cpha266_1389 Cpha266_1388 - 1578441..1579066 RelBE or parDE */RHH-RelE
19 2 Cpha266_1390 Cpha266_1391 - 1579205..1579749 mazEF */XF1863-MazF
20 2 Cpha266_1441 Cpha266_1440 - 1643339..1643784 hicBA */HicB-HicA
21 2 Cpha266_1647 Cpha266_1648 - 1876460..1876865 mazEF */AbrB-MazF
22 2 Cpha266_1700 Cpha266_1701 - 1923747..1924446 relBE */Xre-RelE
23 2 Cpha266_2176 Cpha266_2175 - 2516918..2517531 phd-doc */AbrB-Fic
24 2 Cpha266_2186 Cpha266_2187 - 2524216..2524820 relBE or parDE */PHD-RelE
25 2 Cpha266_2196 Cpha266_2195 - 2528392..2528957 -/COG2442-PIN
26 2 Cpha266_2264 Cpha266_2265 - 2594437..2596088 hipBA */Xre-HipA
27 2 Cpha266_2640 Cpha266_2641 - 3028374..3029140 vapBC */RHH-PIN
28 2 Cpha266_2642 Cpha266_2643 - 3029302..3029882 -/COG2442-PIN
29 2 Cpha266_2655 Cpha266_2656 - 3041064..3041719 vapBC */AbrB-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Cpha266_1377HTH_485.91Cpha266_1376RelE94.37NC_008639
2Cpha266_1951VapI/HTH_XRE/HTH_XRE/HTH_3/HipB64.33Cpha266_1952Plasmid_killer73.23NC_008639
3Cpha266_2175MazE/SpoVT_AbrB87Cpha266_2176Doc/DOC89.94NC_008639
4Cpha266_1388HicB83.58Cpha266_1389Plasmid_stabil/ParE/RelE89.8NC_008639
5Cpha266_2641StbC85.19Cpha266_2640VapC/PIN87.16NC_008639
6Cpha266_1227-61.29Cpha266_1226Plasmid_stabil/ParE/RelE76.89NC_008639
7Cpha266_1379-67.68Cpha266_1380PemK/MazF75.44NC_008639
8Cpha266_1391-62.81Cpha266_1390MazF/PemK74.81NC_008639
9Cpha266_2648-64.87Cpha266_2647VapC/PIN/COG184874.28NC_008639
10Cpha266_2187StbD91.28Cpha266_2188-67.68NC_008639
11Cpha266_1703-65.35Cpha266_1702PIN70.11NC_008639
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.