TADB
Paracoccus denitrificans PD1222 chromosome 1, complete sequence. chromosome

# GENOME INFO
Genome size (bp) : 2852282
Link to NCBI Taxonomy Browser by Tax_id :318586
 
# TA INFO in replicon: NC_008686
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Pden_0103 Pden_0104 - 95326..96074 vapBC */RHH-PIN
2 2 Pden_0141 Pden_0140 - 126242..126934 vapBC */PHD-PIN
3 2 Pden_0144 Pden_0145 - 129586..130160 RelBE or parDE */RHH-RelE
4 2 Pden_0264 Pden_0265 - 242420..243093 relBE */Xre-RelE
5 2 Pden_0483 Pden_0482 - 453006..453667 vapBC */AbrB-PIN
6 2 Pden_0484 Pden_0485 - 454495..455108 relBE */Xre-RelE
7 2 Pden_1215 Pden_1214 - 1184520..1185346 -/ArsR-COG3832
8 2 Pden_1548 Pden_1547 - 1521563..1523102 hipBA */Xre-HipA
9 2 Pden_2075 Pden_2074 - 2076726..2077396 vapBC */RHH-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Pden_0145HTH_463.76Pden_0144ParE/Plasmid_stabil89.33NC_008686
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.