TADB
Polaromonas naphthalenivorans CJ2 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4410291
Link to NCBI Taxonomy Browser by Tax_id :365044
 
# TA INFO in replicon: NC_008781
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Pnap_0062 Pnap_0061 - 65095..65799 vapBC */PHD-PIN
2 2 Pnap_0084 Pnap_0085 - 87552..88234 RelBE or parDE */RHH-RelE
3 2 Pnap_0133 Pnap_0134 - 145719..146532 -/HEPN-MNT
4 2 Pnap_0521 Pnap_0520 - 548057..549600 hipBA */Xre-HipA
5 2 Pnap_1213 Pnap_1212 - 1301419..1302152 vapBC */PHD-PIN
6 2 Pnap_1390 Pnap_1391 - 1476394..1477079 relBE */Xre-RelE
7 2 Pnap_1571 Pnap_1572 - 1660372..1661141 -/RHH-GNAT
8 2 Pnap_1823 Pnap_1822 - 1942861..1943531 vapBC */PHD-PIN
9 2 Pnap_2223 Pnap_2222 - 2372785..2373410 phd-doc */AbrB-Fic
10 2 Pnap_2552 Pnap_2551 - 2690686..2691449 vapBC */AbrB-PIN
11 2 Pnap_2998 Pnap_2999 - 3164670..3165363 higBA (relBE) */COG5606-RelE
12 2 Pnap_3100 Pnap_3099 - 3283530..3284064 -/RHH-COG2929
13 2 Pnap_3682 Pnap_3681 - 3917942..3918634 vapBC */AbrB-PIN
14 2 Pnap_3715 Pnap_3716 - 3956983..3957611 vapBC */PHD-PIN
15 2 Pnap_3904 Pnap_3905 - 4169816..4170318 relBE or parDE */PHD-RelE
16 2 Pnap_3977 Pnap_3978 - 4244727..4245779 -/MerR-PIN

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Pnap_0521HipA84.59Pnap_0522-67.55NC_008781
2Pnap_4017-64.64Pnap_4018HTH_XRE/HTH_3/HTH_XRE74.04NC_008781
3Pnap_2644COG172482Pnap_2645COG1598/HTH_484.33NC_008781
4Pnap_2553HicB/HicB87.93Pnap_2552VapC/PIN/COG1848/COG411388.29NC_008781
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.