TADB
Yersinia enterocolitica subsp. enterocolitica 8081 chromosome, chromosome

# GENOME INFO
Genome size (bp) : 4615899
Link to NCBI Taxonomy Browser by Tax_id :393305
 
# TA INFO in replicon: NC_008800
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 YE0510A YE0510 - 582668..583202 RelBE or parDE */RHH-RelE
2 2 YE1160 YE1159 - 1299175..1299710 relBE or parDE */PHD-RelE
3 2 YE1175 YE1175A - 1314461..1316175 hipBA */Xre-HipA
4 2 YE1658 YE1659 - 1860804..1861441 vapBC */AbrB-PIN
5 2 YE1922 YE1923 - 2101983..2102584 relBE */Xre-RelE
6 2 YE1929 YE1928 - 2105365..2105910 RelBE or parDE */RHH-RelE
7 2 YE2032 YE2033 - 2222976..2223547 phd-doc */PHD-Fic
8 2 YE2089 YE2088 - 2285540..2286174 relBE */Xre-RelE
9 2 YE2116 YE2115 - 2317614..2318582 -/COG5642-COG5654
10 2 YE3480 YE3481 - 3792208..3792761 mazEF, ccd or relBE */RHH-MazF
11 2 YE3843 YE3842 - 4189423..4191055 hipBA */Xre-HipA
12 2 YE4128 YE4129 - 4518288..4519856 hipBA */Xre-HipA
13 2 YE4141 YE4142 - 4533934..4534748 vapBC */AbrB-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1YE1159StbD86.02YE1160RelE93.3NC_008800
2YE1923VapI/HTH_3/HTH_XRE/HTH_XRE88.84YE1922Plasmid_killer/HigB93.27NC_008800
3YE2033StbD86.95YE2032DOC/Doc88.04NC_008800
4YE1653-63.93YE1652HicB/HicB74.97NC_008800
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.